Gene Spea_0259 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0259 
Symbol 
ID5660659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp290648 
End bp291535 
Gene Length888 bp 
Protein Length295 aa 
Translation table11 
GC content47% 
IMG OID641234789 
Producthypothetical protein 
Protein accessionYP_001500122 
Protein GI157960088 
COG category[C] Energy production and conversion 
COG ID[COG2864] Cytochrome b subunit of formate dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAAC AATCGAACAA CCTTTTGGGG TGGTTACTGG GTGCGGGGGT GGCCTTTATA 
CTTTGTGCCA TCAGTGTCGC TGTATCCAGT TACCATGGTG AGCAGGGGCG AGAAACCGTG
ATGCTCTTTG ATAGCTTGGC GTATCTGCCG ATACTGGTAT TTGCAGTCAG CCTATTTACC
GCTTCAAAGT TACATCGTCC TGGTGATCGT ATCGAGGGGG ACAAGGTTCT GCGTCATGAT
GGTATCGCTC GATTAACTCA CTGGACTGCC GCTTTTGGTT GTTTACTTCT ATTGATTACG
GGCATTGCTC TAGGCTTTCT TTTTATTCCA CGCTTTGTTG TCGACGCGAC GGCTACAGCG
ATGATGTTTA ATCTGCACTT TGTCGGTGCT CTATTTTTCG TTTTTGGTTG TGGCCTGTGG
GCTAGTAATC AATTGGTCGA GCCCCGGCGC TTTAGTACAC ATCTACCAGA CGAGTCACTT
TGGATAGAGT TGAAGAAGTC TGTACTGCAT TACACCCATA TGTTGGGTAT GACCAAAACC
CATGTTGAAG CCCCAAAATA TCATCATTCA GGCCGTCTCG CTGGCTTAGT CATTATGGCC
TCCTCTTTTG TGGTTATTTT ATCGGGTTTT GGCAAATTGC TGGCTCGCGG GCTTGATCTG
AATCCTAGCA TCGCAGAGTT GATTAACCTG AGTCATGGCT GGTCGGCACT AGCACTGTTG
TTATTGATCC CTGTGCATGC GCTCTTAGGC GGAGTCGCGC CTTGGGCTTG GAACACATTG
AAAGCCATGG TAACTGGTTA TGTTAGTCGT GATTATGCGC AAAAAGAACA CGCTATATGG
TTTAGAGAAT TAGAAGAAAA GCAGCGTCAT CAGGAGTCGC AACGATGA
 
Protein sequence
MAKQSNNLLG WLLGAGVAFI LCAISVAVSS YHGEQGRETV MLFDSLAYLP ILVFAVSLFT 
ASKLHRPGDR IEGDKVLRHD GIARLTHWTA AFGCLLLLIT GIALGFLFIP RFVVDATATA
MMFNLHFVGA LFFVFGCGLW ASNQLVEPRR FSTHLPDESL WIELKKSVLH YTHMLGMTKT
HVEAPKYHHS GRLAGLVIMA SSFVVILSGF GKLLARGLDL NPSIAELINL SHGWSALALL
LLIPVHALLG GVAPWAWNTL KAMVTGYVSR DYAQKEHAIW FRELEEKQRH QESQR