| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0213 |
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| Symbol | |
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| ID | 5660613 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 225741 |
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| End bp | 226487 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641234734 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_001500076 |
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| Protein GI | 157960042 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0846682 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTGGAAAT GGTTACATTC ATACGCGGAT CCTGAACGCG CCTACAAACT CTCAGGCACC
CTACTACCTT GGTTTGCCAT GCTTGCAATA TCGATGATTG GTCTCGGTAC GGTTTGGGGC
TTGGCTTTTG CTCCGACTGA TTATCAACAA GGTGACAGTT ACCGAATCAT CTTTATTCAT
GTACCAGCCG CTTCTATGTC GATGGCAGCT TACATGGCCA TGGCGACATC TTCGTTTATC
GGACTTGTAT GGCAAATTAA GTCTGCCGAC TGGGCTGCGG CGGCTATTGC ACCAATCGGT
GCGGTCATTA CCTTTATTGC GCTTATTACA GGTGCAACAT GGGGCAAGCC TATGTGGGGT
ACATGGTGGG TTTGGGATGC ACGCTTAACA TCTGAACTAG TACTGTTATT CTTATACCTA
GGTGTTATCT CTCTTTATGC TTCATTTGAA GATAAAGTAT TGGCTGCTAG AGCCGCTGGC
ATTTTAGCAA TCGTTGGTGT GATTAACATT CCAATCATCA AGTACTCTGT AGATTGGTGG
AGCTCACTGC ACCAGCCATC TACAATCAAG ATCACTGAAG AATCTTCTAT GCCTTCAGAG
ATGTTATATC CACTCCTAAT TAACATCATG GGATTCGGTA TAATGATTGG TGCGATAACA
TTAGTGAGAT TTAGATCAGA AATTTTGGCA CGAAATGGCA TGCGTCCATG GGTTCGTGAA
CTTGCTAAAG CAGAAGGGGT CAAATAA
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| Protein sequence | MWKWLHSYAD PERAYKLSGT LLPWFAMLAI SMIGLGTVWG LAFAPTDYQQ GDSYRIIFIH
VPAASMSMAA YMAMATSSFI GLVWQIKSAD WAAAAIAPIG AVITFIALIT GATWGKPMWG
TWWVWDARLT SELVLLFLYL GVISLYASFE DKVLAARAAG ILAIVGVINI PIIKYSVDWW
SSLHQPSTIK ITEESSMPSE MLYPLLINIM GFGIMIGAIT LVRFRSEILA RNGMRPWVRE
LAKAEGVK
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