| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0210 |
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| Symbol | rplQ |
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| ID | 5660610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 223647 |
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| End bp | 224039 |
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| Gene Length | 393 bp |
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| Protein Length | 130 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234731 |
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| Product | 50S ribosomal protein L17 |
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| Protein accession | YP_001500073 |
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| Protein GI | 157960039 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0203] Ribosomal protein L17 |
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| TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000848705 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGCCATC GTAAGAGTGG TCGTCAACTA AACCGTAACA GCAGTCATCG CCAAGCTATG
TTCCGTAACA TGGCATGCTC AATAGTTCGT CACGAAGTGA TCAAAACTAC TGTAGCTAAA
GCGAAAGAAT TGCGTCGCGT AGTTGAACCT CTAATAACAC TTGCTAAGAG TGATAGCGTT
GCAAACCGCC GTTTGGCATT TGCACGTACT CGCGACGCTG AAGTCGTTGG TAAGTTATTT
ACTGAATTGG GTCCACGTTT CCAGGAACGT CCTGGTGGAT ATACCCGTAT TCTTAAGTGC
GGTCTACGTA CTGGTGACAA AGCGCCTATG GCGTATATTG AACTAGTAGG TCGTCCTGAA
GCAGCTGAAG CTGTTGAAGA CACTGCAGAG TAA
|
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| Protein sequence | MRHRKSGRQL NRNSSHRQAM FRNMACSIVR HEVIKTTVAK AKELRRVVEP LITLAKSDSV
ANRRLAFART RDAEVVGKLF TELGPRFQER PGGYTRILKC GLRTGDKAPM AYIELVGRPE
AAEAVEDTAE
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