Gene Spea_0149 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0149 
Symbol 
ID5660550 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp165804 
End bp166181 
Gene Length378 bp 
Protein Length125 aa 
Translation table11 
GC content46% 
IMG OID641234662 
Productgeneral secretion pathway protein I 
Protein accessionYP_001500013 
Protein GI157959979 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG2165] Type II secretory pathway, pseudopilin PulG 
TIGRFAM ID[TIGR01707] general secretion pathway protein I
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAGGC GAACTGATCA AACAGGTATG ACGCTGCTAG AAGTGATTGT TGCCTTGGCG 
GTATTTTCTA TCGCCGCAGT TTCTATCACT AAGAGCTTAG GCGAGCAGAT GGCCAACATG 
CCCATTTTAG AAGAGCGCAC CATGGCACAA TGGGTCGCTC ATAACAAGAT GGTTGATGCG 
CGTTTAGAGC CTAAGTTTCC AGATATTGGT CGTAAAGATG GCCAAACGGA GCTCGCCAAT 
AAAGATTGGT ATTGGCGTAA AGAGGTCATT AAAACGACCG ATGATAATTT TAGAATGATC 
CGTATAAGTG TTAGTGATGA TGAACGCTTT GCTCGGGTCA TTGCTGAGGT GAGCAGCTAT 
GTGCTTAAGG CTGACTAA
 
Protein sequence
MSRRTDQTGM TLLEVIVALA VFSIAAVSIT KSLGEQMANM PILEERTMAQ WVAHNKMVDA 
RLEPKFPDIG RKDGQTELAN KDWYWRKEVI KTTDDNFRMI RISVSDDERF ARVIAEVSSY 
VLKAD