| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0089 |
|---|
| Symbol | fliP |
|---|
| ID | 5660490 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | + |
|---|
| Start bp | 98638 |
|---|
| End bp | 99366 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641234602 |
|---|
| Product | flagellar biosynthesis protein FliP |
|---|
| Protein accession | YP_001499953 |
|---|
| Protein GI | 157959919 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1338] Flagellar biosynthesis pathway, component FliP |
|---|
| TIGRFAM ID | [TIGR01102] type III secretion apparatus protein, YscR/HrcR family
[TIGR01103] flagellar biosynthetic protein FliP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGGCGAG TTTTGCTGAT TTTACTCTTA GGCTTCTCAT CGACGGCATA TGCCAATGAT
GGCTTAACAT TATTCACGTT AAATGATGGT GCAGAGTCTG AGTCTGTGAG CGTAAAGTTG
GAAATTTTGG CATTGATGAC AGTGCTAAGT TTCCTACCAG CTATGTTGAT GATGCTGACC
AGTTTTACGC GCATCATTGT GGTATTGGGA ATACTACGTC AAGCATTAGG CTTGCAGCAA
AGCCCCCCCA ATAAGGTGTT GATCGGAATC GCATTGGTGA TGACCATATT TATCATGCGC
CCCGTTGGTG AAGAGATTTA TGAGAAAGCT TTCCTACCTT ACGATCAGGG CATAATTGAG
TTACCTGAGG CGGTAGAGCG TGGAGAAAAG CCGCTGCGTC AGTTTATGTT GGCACAAACT
CGCGAAACCG ATCTTGAGCA GATGCTAAAG ATTGCCGACG AGCCGACAAC CTTGACCGCC
GAGGAGATCC CGTTTTTTGT ACTGATGCCA GCCTATGTCT TGAGTGAGTT GAAAACGGCT
TTTCAGATTG GCTTCTTGCT GTTTCTGCCT TTTTTGGTGA TCGACTTGGT GGTTGCCAGC
GTGTTGATGT CTATGGGCAT GATGATGCTG TCACCGCTGA TCATTTCCTT ACCATTTAAA
TTAATGGTGT TTGTATTAGT CGATGGCTGG TCGATGACGG TGAGTACCTT AGTGGCCAGT
TATGGTTAG
|
|---|
| Protein sequence | MWRVLLILLL GFSSTAYAND GLTLFTLNDG AESESVSVKL EILALMTVLS FLPAMLMMLT
SFTRIIVVLG ILRQALGLQQ SPPNKVLIGI ALVMTIFIMR PVGEEIYEKA FLPYDQGIIE
LPEAVERGEK PLRQFMLAQT RETDLEQMLK IADEPTTLTA EEIPFFVLMP AYVLSELKTA
FQIGFLLFLP FLVIDLVVAS VLMSMGMMML SPLIISLPFK LMVFVLVDGW SMTVSTLVAS
YG
|
|---|
| |