Gene Snas_6283 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6283 
Symbol 
ID8887507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6627019 
End bp6628254 
Gene Length1236 bp 
Protein Length411 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514996 
Protein GI291303718 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGA CTGAGGCCCA GCAAGCCCGT ACGAATCAAC AACGATCCGA AAGTGAAGCA 
ATGCGAAGCA CCCCTCAACC CAAGTTCCAG CCCAGGATCG TCGCGGCCTC GTCGCTGCTG
GCGGCCGGAC TGTTCCTGGC CGCCTGCGGC CAGGCGCCCG ACACCAAGGA CGGCGCGAAG
GCCGAGACCA AGACCGAGCA ACCGATCGTC GTGACCTACG ACGGCGGACT GTTCGTACTG
GACGGTGAGA GCCTCGACCT CGTCGAGGAC ATCAAACTCG ACGGCTACAA CCGGGTCTCA
CCGGCCGGGG ACGACCGGCA CGTGCTGGTG TCCACCGCGA AGGGGTTCCG CATCCTCGAC
GCCGCCGCCG CGAAACTGTC CGACGACACC TTCAAGGCCG ACAAACCCGG ACACGTCGTG
CACCACGCCG ACAAGACCGT CCTGTTCGCC GACGGCACCG GCGACATCAC CGTCTTCGAC
CCCGAGGACC TGGGCGCGGG ACTGCCCAAG ACCCAGACCT TCCACAGTGA CGACCCGCAC
CACGGGGTCG CGGTCACGCT GGAGGACGGC AGGACCCTGG CCACCTTCGG CGACGAGGAA
TCGGCGAAGG GAGTGCGGGT GCTGGATGCC AAGGGCAAGG AGACCGACCG CGACAACGAC
TGCCCCGGCA CCCACGGCGA GGCGACCGCC GCCGACGAGG TCGTCGCCTT CGGTTGCGAG
AACGGCGTCC TCGTCTACGC CGACGGCAAG TTCTCCAAAA TCGACAGTCC CGACAAGTAC
GGCCGCGTCG GAAGCCAGGA GGGCCACGAG GAGTCCACGA AGCTGCTGGG CGACTACAAG
ACCGACCCGG AAGCGGAACT GGAACGCCCC GAACGGGTCT CGGTGATCGA CCCGGCCAAC
GGCAAGCTGA AACTGGTCGA CCTCGGCACC AGCTACAGCT TCCAGTCCCT GGGCCGTGGC
CCGCACGGCG AGGGACTGGT GCTGGGCACC GACGGCGCCC TGCACGTCAT CGACATGGAC
TCCGCAAAAG TCAGTGACTC CTTCCCGGTC ATCGACAAGT GGGAGGAACC GCTGGACTGG
CAGCAGACCC GGCCGTCCCT GTTCGTTGGC GACCACACCG CCTACGTGAC CAGCCCGGAC
GAGAAGAAGA TCTACGCCGT GGACACGCAC TCGGGTGAGA TCACCGCCGA GACCACGCTT
CCCCAGGCGT CCAACGAGAT CACCGGAGCC CTGTAA
 
Protein sequence
MASTEAQQAR TNQQRSESEA MRSTPQPKFQ PRIVAASSLL AAGLFLAACG QAPDTKDGAK 
AETKTEQPIV VTYDGGLFVL DGESLDLVED IKLDGYNRVS PAGDDRHVLV STAKGFRILD
AAAAKLSDDT FKADKPGHVV HHADKTVLFA DGTGDITVFD PEDLGAGLPK TQTFHSDDPH
HGVAVTLEDG RTLATFGDEE SAKGVRVLDA KGKETDRDND CPGTHGEATA ADEVVAFGCE
NGVLVYADGK FSKIDSPDKY GRVGSQEGHE ESTKLLGDYK TDPEAELERP ERVSVIDPAN
GKLKLVDLGT SYSFQSLGRG PHGEGLVLGT DGALHVIDMD SAKVSDSFPV IDKWEEPLDW
QQTRPSLFVG DHTAYVTSPD EKKIYAVDTH SGEITAETTL PQASNEITGA L