Gene Snas_6279 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6279 
Symbol 
ID8887503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6622282 
End bp6623673 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content71% 
IMG OID 
Productbeta-galactosidase 
Protein accessionYP_003514992 
Protein GI291303714 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCGTA ACGGCAACGG TTTCGGACCG GACTTCACCT GGGGAGCGGC GTCCTCGGCC 
TACCAGGTCG AGGGAGCGGC CACGGCCGAC GGCAGAGGCC CCTCCATATG GGACACGTTC
GCCGCCGCCC CGGGACGCGT CGTCGACGCC TCCACCGGGG AGACGGCGGT GGAGGCGTAC
CACCGCGTCG ACGAGGACGT GGCCGTCATG CGCGAGCTCG GTCTGCGCGC GTACCGGTTC
TCGGTGTCGT GGCCGCGCGT CGTCCCCGAC GGCACCGGCG CGGTCAACCA GGCCGGGCTC
GACTACTACC GCCGGTTGAC CGACCGGCTG CTGGACGCGG GCATCGAACC GTGGGTGACG
CTGTACCACT GGGACCTGCC GCAACCGCTG GAGGACGCCG GCGGCTGGCC CGAACGCGAC
ACCGCGCTGC GGTTCGCGGA CTACGCGCTG ACCGTCCACG AAGCACTGTC GGACCGGGTC
GACAACTGGA TCACCGTCAA CGAACCCTGG TGCGCGGCGT TCCTGGGCTA CGCGTCGGGC
GAGCACGCGC CCGGCCGCCG CGAACCCGCC GCGGCGATCG CGGCGGCCCA CCATCTGCTG
TTGGGACACG GCCTGGCCAC GACGGGCATG CGTTCGGCCG ACGCCTCCTC CCGCATCGCG
ATCGGGCTGA ACTTCTACCC GGTGCACCCG GCCAGCGACC GTCCGGACGA TGTGGACGCC
GCCCGGCGCG TCGACGGCGT CCAGAACCGG CTGTTCACCG AGGCCGTCCT CAGGGGCGCC
TATCCGTCGG ACGTGCTGGC CGACTTCAAA CCGGTGCGCG ATCCGGACTA CATCCACGAC
GGCGACCTGC GGATCATCAG CACCCCGATC GACCGGCTGT GCGTCAACTA CTACAGCCGG
TTCACAGTGA CCGGCACGGC GAACGGCCGC GCCTCGGCCT CGGCCGCGCC CACCGACACC
GGCTCGGCCT GGCCCGGCAA CGAACACATC GGATTCGTCG GCGCCGACCT CCCGGTGACC
GGCATGGGCT GGGAGATCGA CCCCGACGGC CTGCGGGACC AACTGCTGCG GCTGGCCCGG
GAGTACCCCG GCGTCGAACT CGTCGTCACC GAGAACGGCG CCGCCTTCGA CGACGTCCTG
TCCGACGACG GCACCGCCGT CCACGACCAG CGGCGCCTGG TCTACCTGCG TCGACACGTC
GCGGCCTGCG CCGAGGCGAT CGCCGCCGGC GTGCCACTGA GCGGCTACTT CGTGTGGTCA
CTGATGGACA ACTTCGAGTG GGCGTGGGGC TACACGAAAC GCTTCGGAGT GGTCTATGTG
GACTTCGAAA CCCAGCGCCG GGTGGTCAAG GACAGCGGCC ACTGGTACCG CGACCTGATC
GCGGGTGGGT GA
 
Protein sequence
MTRNGNGFGP DFTWGAASSA YQVEGAATAD GRGPSIWDTF AAAPGRVVDA STGETAVEAY 
HRVDEDVAVM RELGLRAYRF SVSWPRVVPD GTGAVNQAGL DYYRRLTDRL LDAGIEPWVT
LYHWDLPQPL EDAGGWPERD TALRFADYAL TVHEALSDRV DNWITVNEPW CAAFLGYASG
EHAPGRREPA AAIAAAHHLL LGHGLATTGM RSADASSRIA IGLNFYPVHP ASDRPDDVDA
ARRVDGVQNR LFTEAVLRGA YPSDVLADFK PVRDPDYIHD GDLRIISTPI DRLCVNYYSR
FTVTGTANGR ASASAAPTDT GSAWPGNEHI GFVGADLPVT GMGWEIDPDG LRDQLLRLAR
EYPGVELVVT ENGAAFDDVL SDDGTAVHDQ RRLVYLRRHV AACAEAIAAG VPLSGYFVWS
LMDNFEWAWG YTKRFGVVYV DFETQRRVVK DSGHWYRDLI AGG