Gene Snas_6248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6248 
Symbol 
ID8887471 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6598986 
End bp6599471 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514961 
Protein GI291303683 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.706336 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTT CGTTCCAAGC GGTGACCGGT GCTCCCGACG TTCGGCCGCG GTTCTTCGAG 
ATCCCCGAGA TCGTCGAACA GCTGCCTCTG AGCAAAGACG GCGTGTACCG GGAGATCCAC
GCCGGGAACT TGGCCGCGAT CCGTATCGGC GGGGCTCACG GCGGCAAGTA CATCGTCCCC
GCACGACTGC TGGACCTGAT GGACGCGCAG ATGCGCGGCG TCGGGTTCGA CACCACCGTC
TCCGAGCTTT CGGGCCGGTT CCTGTCGATC GCTGAGGCCG CGTCGATCCT GCGGATCTCG
CGCCCGGTGT TGGCCAAGCG CGCCCGGGGC CACGAGTTCC CGGCGGCACG GTACGGCGGC
AAGCACATCA TCGCCGGCGC CGTCATCGAC GACATGGAAA CCAAAGCCCT GCATGCGATG
ACGCTGATCC GAACCGACGA TTACGTCGCC TGCGTCCGTC AGACGGCGAT GGAGGTCGCG
GCATGA
 
Protein sequence
MNASFQAVTG APDVRPRFFE IPEIVEQLPL SKDGVYREIH AGNLAAIRIG GAHGGKYIVP 
ARLLDLMDAQ MRGVGFDTTV SELSGRFLSI AEAASILRIS RPVLAKRARG HEFPAARYGG
KHIIAGAVID DMETKALHAM TLIRTDDYVA CVRQTAMEVA A