| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6243 |
|---|
| Symbol | |
|---|
| ID | 8887466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6594912 |
|---|
| End bp | 6595919 |
|---|
| Gene Length | 1008 bp |
|---|
| Protein Length | 335 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003514957 |
|---|
| Protein GI | 291303679 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 42 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTGC TTGTACTGGG CGGGACGTGG TTTGTGGGCC GAGCCATCGT TGAGGAGGCG
CTTGACCGGG CATGGAACGT GACCACCTTC AACCGTGGGC AATCAGGCAG GGGTGTTGTT
GGAGCTGTCA ACGTTCATGG TGACAGGACT TGTGTTGGGG ATATACAGGG GCTAGCTGAA
TATGGGCCTT GGGATGCTCT TGTCGACACG TCAGGGTACG TGCCCCGGAA TGTACTGAAT
GTTGCTTCGA GTCTGTTGTC TCAAGTAAAC CGGTATGTGT TCATGTCGAC GGTAAGCGTC
TACAAAGGTT GGCCAGCAGA GGCACTCTCA GAGCAATCCG ACCTTTTGCA TTGCCCTCCG
GACGCAGATT CGTCATACGG CGAAGACGTC GAGGATGGTC CGACAAGGTA TGGGTACCAA
AAGTCCGGTT GCGAATCAGC GGTGACCGAG GTTTTTGGGG AAAGTCGTTC CCTGCTACTT
CGCCCAGGCG TAGTTCTGGG GCCGCGGGAG TATGTTGGCC GATTGCCGTG GTGGCTGAGG
CGCATCGCAA AGGGTGGGCC TACATTGGCG CCTGGTTCGG CAGAACGTCG TATTCAGCCA
GTTGATGTTC GAGACCTTGC AGAATTCACG GTGCAAGCAA TTGAGGATCG TCAACATGGC
GCATTCAACA TCGCTGCCAA CGGCTCAGAG ACTTTCGGGG GGCTGCTGAA CGCTTGCATT
GCCACTACAC ATAGCAGTGC AGAACTCATC TGGATGTCGG ATGACCGCCT ACTCGCCGCT
GGAGTGCGTC AGTGGTCTGA GATGCCTCTC TGGCGGACAG CACCGGGCAC CTGGGCTGTA
GCTGCCGCAA AGGCGCAGCG AGCGGGGTTG CGATCACGCC CCCTTGTCGA AACGGTGGGC
GCGACCTGGG AATGGATGAA CACCTCACCA GAGATAGCAG CAAATGAGCG CTCGATAGAG
ATCGGCATCG ATTTCTCGAA GGAGCAGGCA ATTCTCGGCC GACGATGA
|
|---|
| Protein sequence | MKLLVLGGTW FVGRAIVEEA LDRAWNVTTF NRGQSGRGVV GAVNVHGDRT CVGDIQGLAE
YGPWDALVDT SGYVPRNVLN VASSLLSQVN RYVFMSTVSV YKGWPAEALS EQSDLLHCPP
DADSSYGEDV EDGPTRYGYQ KSGCESAVTE VFGESRSLLL RPGVVLGPRE YVGRLPWWLR
RIAKGGPTLA PGSAERRIQP VDVRDLAEFT VQAIEDRQHG AFNIAANGSE TFGGLLNACI
ATTHSSAELI WMSDDRLLAA GVRQWSEMPL WRTAPGTWAV AAAKAQRAGL RSRPLVETVG
ATWEWMNTSP EIAANERSIE IGIDFSKEQA ILGRR
|
|---|
| |