Gene Snas_6238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6238 
Symbol 
ID8887461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6590145 
End bp6591218 
Gene Length1074 bp 
Protein Length357 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514952 
Protein GI291303674 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGACA CACAGTTCCC TCGGTTCAGT GCCACGGATG TTCCCCGGTT GCGTCGTGAA 
CTGGCCGAAT GGTACGGCAG TCCTAAAGGG CCTGACTTCT ACTATCAGGC CATTAAGATG
GGACGCCAGG CCATCAAGCC GCCAGGCTCG CCGGAGAAAG CCGCAGTCCA GCTGGCGGCA
ACCGAAACAA AGCGGCTGAG CGAAGGCGAT TTGTGGTACG TCGATGATGA CCTGTGCGCC
CTGCTTAACG CGGCCCACCC GACGATGCCG AAGTTCGCGC CGCAACCGTG GGACCTTCCC
GGCAAGGTCG GGTTCGCGGT GTTCGCCGAG CCTCTCTACC GCCCGCTCAG CGACGACCAA
ACTCTCACCA GCGACCTCGA GGCCCGCGCC GCGGCCGACC CTGACTTCGC GCCGATTGCC
GATCGCCTGT TGCAAGACGA CAGCGGCATT CTCGCGGTGT CTTGGGGCCC AGTGTCCAAC
CCGTACTGGC CAGCTGGCGG CTTGTGGATG TCGTTCTACT CCGAAGCGCT CGCCCACCAG
GACGCCGCGT TCTTCGAAGA TCCCCGCCAA GCAGCCTGGG CCCGCAACCA GCTTCCGGTA
TTGATCGTTG ACAACGAAGC GACCATGGCG TGGCAACACG ATGCCGCGCC CGTCGAAGAG
TTTCAACTGC CCGGCCCTGA TGAGCCGGTG ACCACGTTGT CGTGGGCGCG GTTGGTGTTC
GCCGCGTTCC AGTTGGCGTC GCAAGGCAAC CTGTCGGAGA CCGACACCGT GGCGCCGGGG
CGTCCGGAGC GGCGCCGCAC TGACCGAGCA GGTCTTCCCG CTAAGGACGT GCGCGTGGTT
CGACTTCGCC GGTCGGTGAC CGACAGTCGG GCGGATGACG GTGCGGAAAC GTCGCGGCAG
TACCGGCATC GGTGGGTGGT GCGCGGTCAC TGGCGTAACC ACTGGTACCC GGCCCGCAAG
ACGCACCGAC CCACATGGAT CGCCCCGTAT CTCAAAGGCC CCGAGACCGC GCCGCTGTTG
GGCGGTGAAC GCGTCACCGT CATCGACGCG CCCAAGCAAG CCGACGAATC GTGA
 
Protein sequence
MTDTQFPRFS ATDVPRLRRE LAEWYGSPKG PDFYYQAIKM GRQAIKPPGS PEKAAVQLAA 
TETKRLSEGD LWYVDDDLCA LLNAAHPTMP KFAPQPWDLP GKVGFAVFAE PLYRPLSDDQ
TLTSDLEARA AADPDFAPIA DRLLQDDSGI LAVSWGPVSN PYWPAGGLWM SFYSEALAHQ
DAAFFEDPRQ AAWARNQLPV LIVDNEATMA WQHDAAPVEE FQLPGPDEPV TTLSWARLVF
AAFQLASQGN LSETDTVAPG RPERRRTDRA GLPAKDVRVV RLRRSVTDSR ADDGAETSRQ
YRHRWVVRGH WRNHWYPARK THRPTWIAPY LKGPETAPLL GGERVTVIDA PKQADES