Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6176 |
Symbol | |
ID | 8887398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6532786 |
End bp | 6533520 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | transcriptional regulator, MerR family |
Protein accession | YP_003514892 |
Protein GI | 291303614 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.700284 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGCCGA CCGATCTAGC CGCCGAACAC GGCATCTCGA CCCAAGCCGT CCGCAACTAC GAGCGAGACG GCTACCTGCC CAGCGCCGAG CGCACCGCGT CCGGGTACCG GATCTACACC GAGGCGCACG CGGCGGCGCT GCGCGCGTAC CTGGCGCTCA TCCCCGCTTA CGGGCACGAG GCGGCGGGCC AGATCATGAC CGACGTCCAC GACGACGACG TCGATCATGC CCTGCTGGTC ATCGACCGTG GCCACCAGCA GCTGCTGCGC GACCGCGAAA CCCTTGCCGC CGTGGAGAAC GCCATTGGCA ATCTGATGGA CGACGCGGAA GCTCGCACTG CCGCCGACGG CCACACCGTT CCTGGTCCAT CGCCGGAGAG CTTGCCCTGG ACCATCGGCG ACCTGGCTCA TCGGCTGCGG GTCACTCCGG CGACGCTGCG GAACTGGGAG GAGGCGGGAA TCCTTGTCCC GGAACGAAAC CGAGCCACTG GTTACCGCGT CTACGGCTCC AAGGACATTC GCGACGCGGA ACTGGCTCAC CTGCTTCGGC GCGGCGGCTA TCCGTTGGAG CACATAGCCA CGGTTGTCGA ACAGATCCGG ACCGTCGGCG GTACCGGTAC GTTGGCCGCG TCGCTGGCCG ACTGGCGGCG ACGGCTCACC GCGCGGGGGC TGGCCATGCT CCACAGTGCC ACGAAGCTGA GCGACTACCT GGAACGCCGG GCGCCCATCG GCTAG
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Protein sequence | MRPTDLAAEH GISTQAVRNY ERDGYLPSAE RTASGYRIYT EAHAAALRAY LALIPAYGHE AAGQIMTDVH DDDVDHALLV IDRGHQQLLR DRETLAAVEN AIGNLMDDAE ARTAADGHTV PGPSPESLPW TIGDLAHRLR VTPATLRNWE EAGILVPERN RATGYRVYGS KDIRDAELAH LLRRGGYPLE HIATVVEQIR TVGGTGTLAA SLADWRRRLT ARGLAMLHSA TKLSDYLERR APIG
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