Gene Snas_6169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6169 
Symbol 
ID8887391 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6527176 
End bp6527991 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content71% 
IMG OID 
ProductHAD-superfamily hydrolase subfamily IIB 
Protein accessionYP_003514885 
Protein GI291303607 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACCGA AACTCGTGGT CGTCGATCTC GACGGCACTG TCGTCGGTTA CGGGAACCAT 
CGACTCGCAC CGTCCCCCAC CGTCGTCAAG GCGCTGGCCG ACGTGCGCGC CGCCGGTGTT
CCGGTCGCGG TGGCGACCGG GCGCGCCATC TGGGACGCGC TGCCCACCAT CGCGGCTCTC
GACCTCGCCG ACGGGCTGGT GTCCACCACG CACGGGGCCA TCACCTACGA CCTCGACGCC
GGGCGGATCG TTGGCCGGAC CCCGCTCGAC ACGGTCGAGG CGGTGCGCCG GTTCACCGAG
GCCGAACCCA AGGTGGCCTT CGCCGTCGAA CGCGACGAGG CCGGGTGGTA CCACACCTCG
AACTTCAACC GGGACTTCGA GTCCAAATGG GCCGAGGTCG TCGACCGGGA GACGTTGAGC
GCCGAACCCG CGGTACGGCT GGTGGCGCGA CTGTCGTGGG TGCCGTACCG GCACATGGCC
GCGCCCTGTC CCGAGGCGGA CCGACTCGCC GCGACCGTCG GGCTCGACCC GGCGCTCTAC
CAGGTGGAAC CCGGCTACAA CGGCTGGATC GACGTCGGAC CCGCCGGGGT CACCAAGGCC
ACCGGACTGG CCGTCATCGC CGAGCACTAC GGCGTGACGG CGGCCGACAC GATCGTGTTC
GGTGACGCCG CCAACGACCT GCCCATGTTC GCCTGGGCCG GGCACTCGGT GGCCCTGGGT
CAGGCCCACG ACGTCATCAA GGCCGCCGCC GACGAGGTCG CCCCCAGCGT CACCGACGAC
GGCGTCGCGC ACGTGCTGCG GCGGTGGTTC GGGTGA
 
Protein sequence
MTPKLVVVDL DGTVVGYGNH RLAPSPTVVK ALADVRAAGV PVAVATGRAI WDALPTIAAL 
DLADGLVSTT HGAITYDLDA GRIVGRTPLD TVEAVRRFTE AEPKVAFAVE RDEAGWYHTS
NFNRDFESKW AEVVDRETLS AEPAVRLVAR LSWVPYRHMA APCPEADRLA ATVGLDPALY
QVEPGYNGWI DVGPAGVTKA TGLAVIAEHY GVTAADTIVF GDAANDLPMF AWAGHSVALG
QAHDVIKAAA DEVAPSVTDD GVAHVLRRWF G