Gene Snas_6116 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6116 
Symbol 
ID8887337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6478560 
End bp6479726 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content67% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514833 
Protein GI291303555 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAA AGCAACTCAA GGACCTCCTC ACCGACATGG CCGACGAGGT GCAGCCGACC 
AGGGTCCACG AGCGCGCCGT CGCGCAGTCG AAGCGCATCG GCAGGCGCAA CGCGATCCTG
GCGTCCATCA CGGCGCTGTT GTTGACCGGC AGCGGCCTGT TCGGGTTCAG CGTGCTGGCC
CACGGGATGG GCAACGGCGG CACCGAACAC CAGGTCGCCG ACGGCGAACT GCCGACCTCC
GACGTGAACA AGCTGTCGGG GACCTACTAC CAGGTGTCGG ACCCGGACGG CGAACCTGAA
TCCGTGGTCT CCTGGCAGGC GGGGGGAGAC GAGGTGGCGG AGCCCCTCAC CGCGATCGAT
ACCGAGGACC AGTACTACGC CACCGGCAAC GTCTCCCCCA ACGGCGAGTA CTTCAGCTAT
ATGACGTCGC CGTCCAACGA CGGTGGCGAT CCGGAGGTCA CCGACCGGAT CTTCGTCGCC
ACCTTCGCGG ACAACGCCAC CGGCGAGGTC GCCCAGTACT CCGCCGCCGA GGACCTGTGC
GCCGAACCGG TGTGGGCCCC CGACAGCAAA CGGCTGTTCG TCGACCGCGG CTCGGCCGGA
GACGGCGACC GGACCGGTTT CGTGGACGTC GAAACCAGCG AGTTCACGTC GTTCCCGGTG
GAGAATCCCT GCGACGCGCA GGTGGCCACC AACGCCGACG GCGAGGACCT CGTCTTCTCC
ACCGAGGCTT CCGGTGACTC CGTCGAGGTC TACGCCACCA ACGGCAGCGG CGAACGGACG
GCGACGGGCG CCGCCAAGGT CATGATGGAG AGCGGGCGCT ACATAACCGA ACTGGTCGCG
GTGTCCCCCG ACGGCCGGTT CCTGTGCGTC AGCACCGAAT CCGAACCGGG GAGCTACACC
GAGGACATGT CCGCTGGCCG CTACGGCTAC TGCGACGCCA TCATCGACAC CGGCGCCAAG
GAGGAGATCG AGGTCTCCGA CAACAACGGT GTCCTGCCCA CCGGCAGCCC CTCGGTGTTC
GCCATTCCCG GTCGACTCCT CCTCGAAGGC GACGACGGCA AGGGCAACGG CATCCACCTG
CTCTACGACT ACGACGGCAA GCTCATCGAC GAGGCCTCCT CCCCGATGGG GGAGGAGTCG
CTGCCGTCGG CTTTCGTCCC CGACTAG
 
Protein sequence
MTTKQLKDLL TDMADEVQPT RVHERAVAQS KRIGRRNAIL ASITALLLTG SGLFGFSVLA 
HGMGNGGTEH QVADGELPTS DVNKLSGTYY QVSDPDGEPE SVVSWQAGGD EVAEPLTAID
TEDQYYATGN VSPNGEYFSY MTSPSNDGGD PEVTDRIFVA TFADNATGEV AQYSAAEDLC
AEPVWAPDSK RLFVDRGSAG DGDRTGFVDV ETSEFTSFPV ENPCDAQVAT NADGEDLVFS
TEASGDSVEV YATNGSGERT ATGAAKVMME SGRYITELVA VSPDGRFLCV STESEPGSYT
EDMSAGRYGY CDAIIDTGAK EEIEVSDNNG VLPTGSPSVF AIPGRLLLEG DDGKGNGIHL
LYDYDGKLID EASSPMGEES LPSAFVPD