Gene Snas_6007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6007 
Symbol 
ID8887228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6358825 
End bp6359781 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content67% 
IMG OID 
Productcation diffusion facilitator family transporter 
Protein accessionYP_003514726 
Protein GI291303448 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000180235 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0482641 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTG AAGGCGGCAC CAAGGCCATT GTCGCCGCGC TGGCGGCCAA CCTGGGCATC 
GCGGCGACCA AGCTGGGAGC CTGGGCGCTG ACCATGTCCT CCTCGATGCT CGCCGAGTCG
ATCCACTCGC TGGCCGACTC CGGCAACCAG GCACTGCTGC TGGTGGGCGG CAAGCGTTCC
AAGCGCGGCG CCACCGCCCA GCACCCGTTC GGCTACGGCC GGGAACGCTA TATCTACGCG
TTCATCGTGT CGATCGTCCT GTTCAGCGTC GGTGGTCTGT TCGCGCTGTG GGAAGGGCAG
CACAAGATCT CGGACACCCT GGCCGGCAAG CCGGACACGC TGCTGGAGTC GCAGTGGTGG
TGGGTGCCGA TCGCGGTGCT GGTCGTGGCC ATCGGCCTGG AGACCTACTC CTTCTACACC
GCGATCTCCG AGTCGCGGAA GGCCAAGGGC AAGACCTCCT GGGTCAACTT CATCCGGCGC
GCCAAGGCCC CCGAACTGCC GGTGGTGCTG CTGGAGGACG CCGCCGCGCT GCTGGGCCTG
ATCCTGGCGC TGTTCGGCGT CGGGCTGTCG CTCATCACCG GCGACGGCAT CTGGGACGGC
ATCTTCACGC TGTCCATCGG TCTGCTGCTG GTGATCATCG CCATCATCCT GGCCATCGAG
ACCAAGAGCC TGCTTTTGGG CGAGTCGGCC ACCGACGAAC ACATCGCCGC CATCGAGAAG
GCCATCCTCG ACGGCGACGA CGTCGACGCC ATCATCCACA TGAAGACGCT GCACCTGGGC
CCCGACGAGC TGCTGGTGGC CGCCAAGTTC GCCGTCAAGC ACGACGAGAC CGCCGCTCAG
GTGGCCCGCG AGATCGACGC CGTCGAGGCC CGGATCCGCG CCGCCGTGCC CATCGCGCGG
GCGATCTACC TCGAACCCGA CCTGTACCGA CCCGCGAAGG CCGGCGGAGA TTCATGA
 
Protein sequence
MSAEGGTKAI VAALAANLGI AATKLGAWAL TMSSSMLAES IHSLADSGNQ ALLLVGGKRS 
KRGATAQHPF GYGRERYIYA FIVSIVLFSV GGLFALWEGQ HKISDTLAGK PDTLLESQWW
WVPIAVLVVA IGLETYSFYT AISESRKAKG KTSWVNFIRR AKAPELPVVL LEDAAALLGL
ILALFGVGLS LITGDGIWDG IFTLSIGLLL VIIAIILAIE TKSLLLGESA TDEHIAAIEK
AILDGDDVDA IIHMKTLHLG PDELLVAAKF AVKHDETAAQ VAREIDAVEA RIRAAVPIAR
AIYLEPDLYR PAKAGGDS