Gene Snas_5990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5990 
Symbol 
ID8887211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6342814 
End bp6344217 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content75% 
IMG OID 
ProductCysteine desulfurase 
Protein accessionYP_003514709 
Protein GI291303431 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.955706 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.122747 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTACGT CCACACTCAT AAACCGCCCC GCTGCGGTGA TTCCCCGTCC CCGGCCGCTG 
GCCGAACTGC TGCCCGCCGC CGCGAACCGG GCGCGGGAGC TCGACGTCGT CGAGGCGCCC
GAGGTGCCGC TTGTGGACGG TACGTCGACC CGGTACGCGA ACTTCGACTA CGCCGCCAGT
GCCCCGTGTA TCCGGGCCGC CGCCGACGCG GTGGCCGAAC TGCTGCCCCG CTACACGGCG
GTGCACCGGG GCGCGGGCTG GCTGTCCCGC GAGTGCACCC GGTCCTATGA GGAGGCTCGC
GCCGCCGTGG GACGGTTCCT GGGTTGCCGT CCCGACGACT CGGTCGTGTT CACCAAGCAC
ACCACCGAAT CCCTGAACCT GCTGGCCCGC GCGGTGCCCG AGGGCACCCG GGTGGTCGTC
TTCGACTCCG AGCACCACGC GAACCTGCTG CCGTGGACCG ACCCGATCCG GTTGCCGGTC
CCCGACTCCC CCGCCACCGC GGTGCGTTCG ATCGTGTCGG CCCTCGAGGT GCTGGGCGAC
GAGGCGCCGG TCCTGGTCGC CATCACCGGT GCCTCCAACG TCACCGGCGA GCTGTTCCCG
ATCGCCGAGG TCGCCGTCGC GGCCCGCCGC TTCGGTGCCC GGGTGGTGCT GGACGCCGCG
CAGCTGGCCC CGCACCGCGC GATCGACATC GCCGCGCTGG GCGTCGACTA CGTCGCGATC
TCCGGCCACA AGCTGTACGC CCCGTTCGGC GCCGGGGTGC TGGCCGGACG CTCCGACTGG
CTCGACGCCG CCGACCCGTT CCTGGCCGGT GGCGGGGCCA CCGCCACCGT CGGCGACGCC
ACCTGCGACA TCACCTGGAA GACCGGCCCG GCCCGCCACG AGGCGGGCAG CCCCAACGTC
ATCGGCGCGG TGGCGCTGGG CGCGGTCTGC GAGGCCCTGT CGAACGCCCG CCGTTCCGAG
CTCGTCGCCC GCGAGGACGC GCTGCGCTCC CGGCTCGCCG ACGGCCTGTC GGCGATCCCC
GGCGTCAACC AGCTGCACAT CTTCGGCCCC GACTCCGACC GGGTCGGCAC CGTCGCGTTC
ACGATCGACG GACTGTCGGC CGGAGTCGCG GCGGCGGCCC TGTCGGCCGA GTACGGCATC
GGCGTCCGCG ACGGCCTGTT CTGCGCCCAC CCGCTCACCC GCCGCCTCGT CGGCCGCCAC
CGCACCACCG CGCCGAGTGG TTGCGGCGGC GGCGAACCCG CCTCCCCGCA GGCGCTGCGG
GCCAGCATCG GCCTTGGCAC CACCGAAGCC GAGGTGGACC GGCTCATCGC CGCCGTCGCC
GAGCTCGCGG CCGCGGGCCC GGCCTGGAAC TACGCCGAAG TGGACGGACG CCAGACGCCG
GTCCCCGATC CGCGAGTCGG CTGA
 
Protein sequence
MATSTLINRP AAVIPRPRPL AELLPAAANR ARELDVVEAP EVPLVDGTST RYANFDYAAS 
APCIRAAADA VAELLPRYTA VHRGAGWLSR ECTRSYEEAR AAVGRFLGCR PDDSVVFTKH
TTESLNLLAR AVPEGTRVVV FDSEHHANLL PWTDPIRLPV PDSPATAVRS IVSALEVLGD
EAPVLVAITG ASNVTGELFP IAEVAVAARR FGARVVLDAA QLAPHRAIDI AALGVDYVAI
SGHKLYAPFG AGVLAGRSDW LDAADPFLAG GGATATVGDA TCDITWKTGP ARHEAGSPNV
IGAVALGAVC EALSNARRSE LVAREDALRS RLADGLSAIP GVNQLHIFGP DSDRVGTVAF
TIDGLSAGVA AAALSAEYGI GVRDGLFCAH PLTRRLVGRH RTTAPSGCGG GEPASPQALR
ASIGLGTTEA EVDRLIAAVA ELAAAGPAWN YAEVDGRQTP VPDPRVG