Gene Snas_5988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5988 
Symbol 
ID8887209 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6339997 
End bp6341142 
Gene Length1146 bp 
Protein Length381 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514707 
Protein GI291303429 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.253106 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACGAC TACTTGCTGT CATCGGCGCT GTCGTGGCCC TCGTGTTCGC AGCTCAGGTC 
GCCGCCTTCG CCGAGCCGGT CCCCGAAAGT CTTGCGGCGC AGCCGATCGC CGGGGCGACC
TTCAAGGGAC CGGTCCACGC GCTCGCTTAC GCGCGCGGCA AGTTCTTCGT CGGCGGCGAG
TTCGCCGAGG CCGTCGCCGA CGGCAAACTC CAGCAGCGCA CCCACCTGGC GGCGGTGTCC
CCCGAGGGCG ACCTCGAGGT CTTCTCCCCG GAACTGAACG GCCCCGTCTA CGCGCTGGCC
ACCGGTTCCC ACTACCTGTA CGTCGCCGGA CGCTTCACCG AGGCCAACGG CCACCCCGCC
CGGCACCTGG CCCGGTTCTC GCTGCGCACC GGCGCCGTGG ACCGCGACTT CGACGTCTCC
GTCAACGCGC TGCCTCGCGC CCTGGAACTC GACGGCACCC GGCTGTACAT CGGCGGGGAC
TTCAACACCG TCAACGGCCA GCCGCGTGGC AAGGTTGCCG CCGTCAGCAC CGGCACCGGT
GGCCTCGTCG GGGACTTCGC CCCGATGTTC GACCGGGGCG TGCGGACGCT GGAAGCCGCC
AACGGCAAGC TCTACGTCGG CGGCGGCTTC ACCGCCGTGG GTGACACCCA GGTCCGCAAA
CTCGCCGCCC TGAACCCCGA CTCCGGCGCG GTGTACTCCA GCTTCGACCC ACAGGACAAG
GGCCTCGTCT ACGACATCGA CGCCTACGAC GGCCGGATCT ACGCCGCCAC CGGCGGCCAG
GGCGGCCGCG TGATGGCCTA CGACTCCGGC GGCGGCACCG ACTGGGAGCG CATCACCGAC
GGCGACGTCA CCGCCGTCTC GGTCAGCCGC GGCGTCGTCG TGGCCGGTGG CCACTTCGAC
AGGCTGTGCG CCGGAGACGA CCTGGGCGCC AACGGGCGGT GCCTGGACGG CGTCTTCGCC
GAACGCGGCA AGCTGTTCGC CGTCAGCACC GGCAACTCCG TCCACTCATG GAATCCCGGC
GCCAACTCGG TCACCGGCAC CCACTTCCTG GCCCGGGGCG GCGGCGTGCT CGCCGCGGGC
GGTTCGTTCT CGACCTTCGC CGGCGGTGAG ATCAACCGCC GCGGACTGGC CCTGTTCCCG
TACTAG
 
Protein sequence
MRRLLAVIGA VVALVFAAQV AAFAEPVPES LAAQPIAGAT FKGPVHALAY ARGKFFVGGE 
FAEAVADGKL QQRTHLAAVS PEGDLEVFSP ELNGPVYALA TGSHYLYVAG RFTEANGHPA
RHLARFSLRT GAVDRDFDVS VNALPRALEL DGTRLYIGGD FNTVNGQPRG KVAAVSTGTG
GLVGDFAPMF DRGVRTLEAA NGKLYVGGGF TAVGDTQVRK LAALNPDSGA VYSSFDPQDK
GLVYDIDAYD GRIYAATGGQ GGRVMAYDSG GGTDWERITD GDVTAVSVSR GVVVAGGHFD
RLCAGDDLGA NGRCLDGVFA ERGKLFAVST GNSVHSWNPG ANSVTGTHFL ARGGGVLAAG
GSFSTFAGGE INRRGLALFP Y