| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5946 |
|---|
| Symbol | |
|---|
| ID | 8887167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6307387 |
|---|
| End bp | 6308355 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | Trans-hexaprenyltranstransferase |
|---|
| Protein accession | YP_003514666 |
|---|
| Protein GI | 291303388 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.112624 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAATTCG TCGACCCGGA ACTGGAAGCC TCGGTCTCCC GGCGGCTTGA GGTGATCGAA
AAACGGCTGC AGGAGGTCAT CGACTCCGGG GACGCCTTCC TGACCGAGGC GGCCTCGCAC
GTCCTCAAGG CGGGGGGCAA ACGGTTCCGT CCGATGCTGT CGGTCACCGC CGCCCACTTC
GGCGACCCGG ACGCGCACGG CGTCATCGAG TCGTCCCTGG TCATGGAGCT GACCCACCTG
GCGACCCTGT ACCACGACGA CGTCATGGAC GAGGCCGCGA TGCGACGCGG CGCGCCCAGC
GCCAACTCGC GCTGGTCCAA CTCGATCGCG ATCCTGTCGG GCGACTACCT GTTCGCGGTG
GCCTCCGAAC TGGTCGCCGA GCTGGGCTCG GAGACGGTCC GGGAACAGGC CCGCACCTTC
TCCCGGCTGG TCCACGGCCA GATCGCCGAG ACCGTCGGCC CGCCCGAGGG CGTCGACCCG
GTCGACTGGT ACCTGCGGGT GCTCACCGAC AAGACCGGCT CGCTGATCGC CACCGCCGCC
CGGCTGGGCG CCCAGTTCGC GGGGGCCCCG ACGTCGGTCG TCGACGCGGT CGCCGAGTAC
GGCGAGACCA TCGGCGTGGC CTTCCAGCTG TCGGACGACC TGCTGGACAT CGCCTCCGAC
GGCGACACCT CCGGCAAGGT GCAGGGCCTC GACCTCATGG AGGGCATCCC GACGCTGCCG
GTGCTGTACG CCCAGGTCGG CGACGACACC TCGCCGCGGC TGCGCGAGCT GGTGTCCAAA
CCGGTGGCCC AGGAGGACCT GGAGGAAACC CTGGAACTGC TGCGTTCCTC GGCGGCCATG
AAGCAGGCGC GCAAGACCCT GGACGAGTTC GGGGAGCGCG CCAAGGCGGT GGCGGGCAGC
CTGCCCGCGG GCTCCACTCG CGACGCTCTC ACCGGAATGT GCGACTACAT GGTGGCCCGC
AGCAGCTGA
|
|---|
| Protein sequence | MEFVDPELEA SVSRRLEVIE KRLQEVIDSG DAFLTEAASH VLKAGGKRFR PMLSVTAAHF
GDPDAHGVIE SSLVMELTHL ATLYHDDVMD EAAMRRGAPS ANSRWSNSIA ILSGDYLFAV
ASELVAELGS ETVREQARTF SRLVHGQIAE TVGPPEGVDP VDWYLRVLTD KTGSLIATAA
RLGAQFAGAP TSVVDAVAEY GETIGVAFQL SDDLLDIASD GDTSGKVQGL DLMEGIPTLP
VLYAQVGDDT SPRLRELVSK PVAQEDLEET LELLRSSAAM KQARKTLDEF GERAKAVAGS
LPAGSTRDAL TGMCDYMVAR SS
|
|---|
| |