| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5907 |
|---|
| Symbol | |
|---|
| ID | 8887125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6267282 |
|---|
| End bp | 6268145 |
|---|
| Gene Length | 864 bp |
|---|
| Protein Length | 287 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | 3-hydroxyacyl-CoA dehydrogenase |
|---|
| Protein accession | YP_003514628 |
|---|
| Protein GI | 291303350 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACAGC GGTTCGCGGT GGCCGGTGCC GGGACGATGG GTGCCGGTAT CGCCTATGTC
GCAGCTGGCA GTGGGTACGA GGTGACCCTT GTGGAGATCG ACGAAGCCCG GGGACGGGCA
GCTGTGGACG GTATCCGCGA CTGGGCGCGA AAGGCGGTGG AGCGGGGACG CAGCACTTCG
GAGGAAGCCG CGGCCACGCT TGAGCGACTG CGCCTTGTGA CTGAATTCAC CGACGTCGAT
CCCGAACCGG CGGTGTTCGT CGAGGCGGTA CCGGAGCGTC CGGAGCTGAA GCACCAGGTG
CTCGCCGCCG CCGAACAGCT GCGGCCGGAG TTGCTGGCGT CCAACACCTC CAGCATCTCC
ATCGACTCAC TGGCCGCCCG GTTGGAGGCG CCGGAACGGT TCTGCGGGCT GCACTTCTTC
AATCCCGTGT ACGCCATGGC ATTGCTGGAG ATCGTGATCG GCGACAAGAC CTCGGACGCC
TCCCGCGAGG CGGCCCTGGC GGTGGCGCGG CGGCTCGGCA AGGAACCGGT GGTGGTGCGC
GACTCCCCGG GATTCGCGAC CTCGCGACTG GGCAACGCGC TCGGACTGGA GGCGATCCGG
ATGCTGGAAT CGGGAGTGGC CTCGGCCGCC GACATCGACA AGGCGATGTC ACTGGGCTAC
CGGCACCCGA TGGGCCCGCT CGAACTGAGC GATGTGGTGG GTCTGGACGT CCGGCTGGAC
ATCGCCCGCA GCCTGCAGGC CGCCTACGGC GACCGGTTCG AGCCGCCGCG CACCCTCATC
GACCTTGTCG CGCAGGGAAA GCTGGGCAAG AAGAGCGGCC AGGGCTTCTA CACCTGGGTC
GACGGGAAGA AGGTCGAGGG ATGA
|
|---|
| Protein sequence | MSQRFAVAGA GTMGAGIAYV AAGSGYEVTL VEIDEARGRA AVDGIRDWAR KAVERGRSTS
EEAAATLERL RLVTEFTDVD PEPAVFVEAV PERPELKHQV LAAAEQLRPE LLASNTSSIS
IDSLAARLEA PERFCGLHFF NPVYAMALLE IVIGDKTSDA SREAALAVAR RLGKEPVVVR
DSPGFATSRL GNALGLEAIR MLESGVASAA DIDKAMSLGY RHPMGPLELS DVVGLDVRLD
IARSLQAAYG DRFEPPRTLI DLVAQGKLGK KSGQGFYTWV DGKKVEG
|
|---|
| |