| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5893 |
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| Symbol | |
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| ID | 8887109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 6252069 |
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| End bp | 6253592 |
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| Gene Length | 1524 bp |
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| Protein Length | 507 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003514614 |
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| Protein GI | 291303336 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.186774 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT GGTGGCGAGA CGCCGTCATC TACCAGGTGT ACCCGCGCAG CTTCGCCGAC
TCCAACGGCG ACGGTATGGG CGACATGCCG GGCATCCGCG AGAAACTCCC CTATCTGGCG
AAGCTGGGGG TGGACGCGGT GTGGCTGTCG CCGTTCTACA CCTCACCGAT GCACGACGGC
GGTTACGACG TCGCCGACTT CCGCGACGTG GACCCGATGT TCGGCGGCCT CGCCGATTTC
GATCGGATGG TCACCGAGGC GCATCGCCTG GGCCTGCGGG TCATCGTCGA CATCGTCCCC
AACCACTGCT CCACCGAACA CGAGTGGTTC AAGGCCGCGC TGGCGGCGGG CCCGGGTTCG
CCGGAGCGGG AACGGTTCCA CTTCCGCGAC TCGCCCGACG GGCCGCCCAA CAACTGGCCG
TCGATCTTCG GCGGTCCGGC GTGGACCCAG GTTCCCGACG GCCAGTGGTA CCTGCACCTG
TTCGACTCCA GCCAGCCCGA CTTCAACTGG GACAACCCGG AGATCCACGC CGAGTTCCTC
GACGTGCTGA AGTTCTGGCT GGACCGGGGC GTGGACGGGT TCCGCATCGA CGTCGCGCAC
GGCATGGTCA AGGAACCGGG ACTGCCGGAC CTGCCGGAGG ACAAGGCCAC CGAACTGCTG
GGCGGCAGCC GAACCCCGTA CCTGGACGTC GACGGGGTGC ACGAGATCTA CCGCGCCTGG
CGGCAGGTCC TCAACTCCTA TGAGGGTGAC CGGATGGCCG TCGCCGAGGC GTGGGTGGAG
ACCCCGGAGC GCCGGGCCCG CTACGTGCGC GGCGACGAGC TGCACCAGGC GTTCAACTTC
GACCTGCTGA AATCCGACTT CTCCGCGACC GAGTACCGCA AGGTCATCGA CGCCGAGATG
TCGATGGCCA ACAGCGTGGG CGCCGTGCCC ACCTGGGTGC TGTCCAATCA CGACCGCTAC
CGGCACGTGA CCCGGTTCGG CGACGGCCCG CTGGGGCTGG CCCGGGCCCG GGCCGCGACG
CTCACCATGC TGGCGCTGCC CGGTTCGTCC TACCTGTACC AGGGCGAGGA ACTCGGCCTC
CCCGAGGTGC TCGACCTGCC CGAGGACGTG CTCCAGGACC CGGTCTGGGA ACGTAGCGGC
CACACCGACC GGGGCCGCGA CGGCTGCCGG GTTCCGTTGC CGTGGAAGCG AAGCGGCCCG
TCCTTCGGCT TCGGTCCCGG CGACAGCTGG CTGCCGCAGC CTGGCGACTG GGGCAGCCTG
TCGGCCGAGG CCCAGGACGG CACCGAGGGC TCCACACTGG AGTTCTACCG CGAGGCGCTG
CGACTGCGTC GCGAACACCG GCCGCAGGCG TTGATCTGGA GCGAGGGTGC CAACGGTGAC
GTACTGGCGT TCTCCAACGG CGCGCTGCGC TGCGTCACCA ACTTCGGCGA CAGCCCGATC
CGGCTCGACG GCGAGGTGCT GCTGAGCAGT TCCCCCCTCG TGGACGGACA GCTGCCGGGC
AACGCCGCCG CCTGGATCCG CTAG
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| Protein sequence | MSQWWRDAVI YQVYPRSFAD SNGDGMGDMP GIREKLPYLA KLGVDAVWLS PFYTSPMHDG
GYDVADFRDV DPMFGGLADF DRMVTEAHRL GLRVIVDIVP NHCSTEHEWF KAALAAGPGS
PERERFHFRD SPDGPPNNWP SIFGGPAWTQ VPDGQWYLHL FDSSQPDFNW DNPEIHAEFL
DVLKFWLDRG VDGFRIDVAH GMVKEPGLPD LPEDKATELL GGSRTPYLDV DGVHEIYRAW
RQVLNSYEGD RMAVAEAWVE TPERRARYVR GDELHQAFNF DLLKSDFSAT EYRKVIDAEM
SMANSVGAVP TWVLSNHDRY RHVTRFGDGP LGLARARAAT LTMLALPGSS YLYQGEELGL
PEVLDLPEDV LQDPVWERSG HTDRGRDGCR VPLPWKRSGP SFGFGPGDSW LPQPGDWGSL
SAEAQDGTEG STLEFYREAL RLRREHRPQA LIWSEGANGD VLAFSNGALR CVTNFGDSPI
RLDGEVLLSS SPLVDGQLPG NAAAWIR
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