Gene Snas_5809 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5809 
Symbol 
ID8887025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6177302 
End bp6178000 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content69% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514532 
Protein GI291303254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.455834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.634853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATTC GCGCGATCGC CGCGATGGGC CTGGCCGCCG CCGCACTGCT GACCGTGTCC 
GCCTGCCGGG TCGAACAGGG CGCCGCGCTG TTCGTCGGCG ACGAGCGGAT CAGCGAGAAG
CGGGTCGACG AGGTGGTCGA CAGCATCTCG GCCTCCGACC GGGCGAAGCT GGCCGATCTG
AACCAGCTCA CCGGCGGGCA GCTGCCGGAC ATCTCGACGG GGAACCTGCG CGGCTACGTC
GTGGACGCGC TGGTGGTCAC CGAGCTGGGT CAGCGGGTCG CCGCCGACAC CGGTGTCAAG
CCGGACCGCG AGTCCTCGTC GGTGATCAAG AAGAACTGGG AGCTGCTGGA GCTCGACAGC
GACAGTGAGT TCGTCCAGCT GACCGCCGAG GCCGAGGCGT ACCGCACCGT GCTGGTGGAC
GGGTCCAAGC CGCACCGCCC CAGCGACAAG GAGGTCGACG CGCTGACCGC CCAGCTGGAG
CACACCTTCG GGCAGGAGCT CGACGAGCAG CAGAAGGCCG GGTTCGCTCA GTTCCTCACC
AGTGAGGACG GACAGGTCGT CGTCGGTCAG CAGCGGCAGG TCTCCGACTA CATCGCCGAG
TACGACGTGA CCGCCAACCC GCGCTACGGG CAGTCGTTCA TCGTGATCGC CCGCAACGCC
GGACCGCAGC CGCTCATCAC CTCCGACATC CCCAGCTGA
 
Protein sequence
MRIRAIAAMG LAAAALLTVS ACRVEQGAAL FVGDERISEK RVDEVVDSIS ASDRAKLADL 
NQLTGGQLPD ISTGNLRGYV VDALVVTELG QRVAADTGVK PDRESSSVIK KNWELLELDS
DSEFVQLTAE AEAYRTVLVD GSKPHRPSDK EVDALTAQLE HTFGQELDEQ QKAGFAQFLT
SEDGQVVVGQ QRQVSDYIAE YDVTANPRYG QSFIVIARNA GPQPLITSDI PS