Gene Snas_5802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5802 
Symbol 
ID8887018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6164244 
End bp6165395 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514525 
Protein GI291303247 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0581425 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.519779 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAACGCC GCACCGTTTT GCTGGGCACC ACCGTCGCCG TCGGCGGCGC GACCGGCCTG 
GCCGGAAGCC TGTGGCACCA GGCCTTCGCC GACCCCGCCC AACCCGGACC CAGCCCCTAC
GGCGACCTGC TCGAGGCCGA CGCCAACGGC ATCCGGCTGC CGGAGGGCTT CACCTCCCGT
GCCATCGGCG AGTCCAGTAA AGACGTCGCC GGTTACACGT GGCACGACGC CCCCGACGGC
GGCGCCTGCT TCGAGACCGA GGACGGCTGG ATCTACGTGT CCAACAGCGA GATCGAGAAC
AACGAGGGTG GCGCCTCGGC CGTCCGCTTC ACCGCGGACG GCGAGATCCA CTCCGCCTAC
CGGATCCTGG GCGGCACCGA ACGCAACTGC GCCGGGGGTG CCACCCCGTG GGGCACCTGG
CTTTCCTGCG AGGAGACCGA ACGCGGCGAG GTCTACGAGA CCGACCCGAC CGGCGAGAAG
GAGGCCGTCG TCCACCCGGC GATGGGCCGG TTCCAGCACG AGGCCGCCGC CTGCGATCCC
GACCGCAAGG TCGTCTACCT GACCGAGGAC GAGAGCGACG GCTGCTTCTA CCGGTTCACG
CCCGACAACT GGGAGGACCT GTCGGCCGGA CGGCTCGACG TGCTGACCGA GTCCGACGGA
ACCCTGGCCT GGGAGGAGGT CCCCGACCCG CTGGCCGAGG ACGAGGAGAC CCGGTTCCAG
GTGTCGTCGG CCAAGAAGTT CGACGGCGGC GAAGGTTGCT GGTACACCAA CGGCATCTGC
TACTTCACCA CCAAGGGCTC CAACACCGTG TGGGCCTTCA ACGCCGCCGA CGACACCATC
GCCGTCGCCT ACGATGACGA CGAAGTGGAC GGTGATGCCC CGCTGCACGG CGTGGACAAC
ATCACCGGCG CCCGCTCCGG CGACCTGTTC GTCGCCGAGG ACGGCGGCGA CATGGAGATC
AACATCATCA CGCCCGACGA GGTCGTCGCG CCGTTCCTGC GCATCGAGGG GCACGACGAA
TCCGAGATCT GCGGACCGGC GTTCTCCCCC GACGGGAAGC GGTTCTACTT CTCGTCGCAA
CGCGGCAGCG GCGGTTCCGA CTCCGACGGA ATCACTTATG AAGTAACCGG TCCCTTCCGC
GATTCCGCCT AA
 
Protein sequence
MKRRTVLLGT TVAVGGATGL AGSLWHQAFA DPAQPGPSPY GDLLEADANG IRLPEGFTSR 
AIGESSKDVA GYTWHDAPDG GACFETEDGW IYVSNSEIEN NEGGASAVRF TADGEIHSAY
RILGGTERNC AGGATPWGTW LSCEETERGE VYETDPTGEK EAVVHPAMGR FQHEAAACDP
DRKVVYLTED ESDGCFYRFT PDNWEDLSAG RLDVLTESDG TLAWEEVPDP LAEDEETRFQ
VSSAKKFDGG EGCWYTNGIC YFTTKGSNTV WAFNAADDTI AVAYDDDEVD GDAPLHGVDN
ITGARSGDLF VAEDGGDMEI NIITPDEVVA PFLRIEGHDE SEICGPAFSP DGKRFYFSSQ
RGSGGSDSDG ITYEVTGPFR DSA