| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5758 |
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| Symbol | |
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| ID | 8886974 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 6121440 |
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| End bp | 6122231 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | |
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| Product | Xylose isomerase domain-containing protein TIM barrel |
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| Protein accession | YP_003514481 |
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| Protein GI | 291303203 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.625631 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGTG CGTCCCCACC AGTATTGCTC TCGACATCCT CCGTATATCC GGAACCGACC
GCGGTGGCGT TCGAGCTCGC GGCCAAGCTC GGCTACGACG GGGTCGAGGT GATGGTGTGG
ACCGACAGCG TCAGTCAGGA CTTCCGGACG CTGGCCACAC TGTCCGATCA CTATGGAGTG
AAGGTGGGCT CGGTGCACGC GCCCTGCCTG CTCATGACCC AACGGGTGTG GAGCAAGGAC
CCGTGGGAGC GGCTGCGCCG CGCCGCCGTC ATGGCCGAAC ACCTGGAGGC GTCCACCGTC
GTCATCCACC CGCCGTTCGC CTGGCAGCGC GGCTACGGCC GGGTGTTCCC CGCCGGGCTG
GAGCGGATGG CGCAGCGGTT CCCGCAGCTG CGGTTCGCGG TCGAGAACAT GTACCCGATC
AAGATGGCGC GCAAGGGTTT CGTGCCCTAC GCGCCGCACT GGGACCCGAC CAACCCCGGC
TACGACAACT ACACCCTCGA CCTGTCGCAC TGCGCGGCGT CGAACTCCGA CGCGCTGGAG
ATGGCCGAGC GGATGGGGTC CAACCTGACC CACGTCCACC TGGGTGACGG CGCCGGTCCC
GGGCGCGACG AGCACGCGGT ACCGGGGCGC GGCAACCAGC CGTGCGCCGA ACTGCTGCGC
AAGCTGGCCA CCTCGGGCAA CGACTTCACC GTCGCGGTGG AGGTGTCGAC CCGCAAGTCC
GGGCACCGCG CGGTCCGTGA GGCCGATCTG GCCGAATCAC TGAATTTCGC GCGCCGCCAT
TTGGAGGGTT AG
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| Protein sequence | MAGASPPVLL STSSVYPEPT AVAFELAAKL GYDGVEVMVW TDSVSQDFRT LATLSDHYGV
KVGSVHAPCL LMTQRVWSKD PWERLRRAAV MAEHLEASTV VIHPPFAWQR GYGRVFPAGL
ERMAQRFPQL RFAVENMYPI KMARKGFVPY APHWDPTNPG YDNYTLDLSH CAASNSDALE
MAERMGSNLT HVHLGDGAGP GRDEHAVPGR GNQPCAELLR KLATSGNDFT VAVEVSTRKS
GHRAVREADL AESLNFARRH LEG
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