| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5744 |
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| Symbol | |
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| ID | 8886960 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 6108294 |
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| End bp | 6109610 |
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| Gene Length | 1317 bp |
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| Protein Length | 438 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | putative RNA polymerase sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003514467 |
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| Protein GI | 291303189 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.643719 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.514642 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGGGAA CAGACACAGC CCCCACGATC GAGACGGTGT TCCGCATCGA AGCCGCGCGG
ATCATCGCCG GGGTGACCCG CGTCGTGCGC GACATCGGCA TCGCCGAGGA GTTGGCGCAG
GACGCGCTGG TCGCCGCGTT GGAGCAGTGG CCGCGGTCGG GTGTCCCGGA CAAGCCGGGC
GCCTGGCTCA TGGCCACCGC CAAGCATCGC GCCATCGATC TCGTCCGGCG CAAGGAGACC
TACGCGCGCA AGCTCGCCGA GGTCGGCCGG ACCCTGGAGG ACGTGCCCCC GCCGCCCGAA
CCCGGTGACC CCGAGGACAT CGACGACGAC CTGCTGCGGC TGATCTTCAC GTCCTGTCAC
CCCGTGCTGT CCACACAGGC CCGGATCGCG TTGACGCTGC GACTGCTGGG CGGACTCACC
ACCGAAGAGA TCGCCCGCGC CTACCTGTCC TCCGAACCGA CTGTCGCGCA ACGGATCGTG
CGGGCCAAGC GCACACTCGC CAAGGCGGGG GTGCCGTTCG AGGTTCCCTA CGGCGAGGAC
CGCGGGGCCC GGCTGTCCTC GGTTCTGGAG GTCATCTACC TCATCTTCAA CGAGGGCTAC
TCGGCCACGT CGGGAGAGAA CCTGGTGCGG CCCGTCCTGT GCGAGGACGC GCTGCGGCTG
GCCCGGGTCC TACAGGGACT GATGCCCGAC GAGCCCGAGG TGCACGGACT GGCCGCGCTG
TTGGAGTTCC AGGGCTCCCG GCTGCCCACG CGCACCGGCC CCGACGGGGA GCTGGTGCTG
CTGGCCGACC AGGATCGCTC CAAATGGGAC CGGCTGCTGA TCCGGCGCGG CATGGCGGCC
CTGCGGCGGG CGGGCGTCGG CGAGTACTCG TTGCAGGCGG CCATCGCGGC CTGTCACGCC
CGCGCGAATC GTTACGCCGA CACCGATTGG ACCATGATCG CGTCGCTGTA CGAGCGGTTG
ATGGCGCTGA CGCCGTCCCC CGTGGTGGAG CTCAATCGGG CGGTGGCGGT GGCGATGGCC
TACGGACCGC AGGCGGGCCT TGAGATCGTG GACGCGTTGG CCGAGTTGGG TTCGCTGTCG
GACTACCACC TGCTGCCCAG TGTCCGGGGC GATCTGCTGG AACGGCTCGG CCGCACCGCC
GAGGCGCGCG CCGAGTTCGA GCGGGCCGCC GCGCTCACCG GCAACGCCCG GGAGCGCGAC
CTGCTGCTGG CCCGGGCCGA GCGAATCCGG AAGTTACCCC TACCGCCGAT GTTTGTGTTA
TCTCCACTGC CGAATCGGTT CCGGCGCCGG AGGTTTGAGG TCCAACCCCG ATGTTGA
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| Protein sequence | MTGTDTAPTI ETVFRIEAAR IIAGVTRVVR DIGIAEELAQ DALVAALEQW PRSGVPDKPG
AWLMATAKHR AIDLVRRKET YARKLAEVGR TLEDVPPPPE PGDPEDIDDD LLRLIFTSCH
PVLSTQARIA LTLRLLGGLT TEEIARAYLS SEPTVAQRIV RAKRTLAKAG VPFEVPYGED
RGARLSSVLE VIYLIFNEGY SATSGENLVR PVLCEDALRL ARVLQGLMPD EPEVHGLAAL
LEFQGSRLPT RTGPDGELVL LADQDRSKWD RLLIRRGMAA LRRAGVGEYS LQAAIAACHA
RANRYADTDW TMIASLYERL MALTPSPVVE LNRAVAVAMA YGPQAGLEIV DALAELGSLS
DYHLLPSVRG DLLERLGRTA EARAEFERAA ALTGNARERD LLLARAERIR KLPLPPMFVL
SPLPNRFRRR RFEVQPRC
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