Gene Snas_5742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5742 
Symbol 
ID8886958 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6107414 
End bp6107752 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content64% 
IMG OID 
Producttranscriptional regulator, PadR-like family 
Protein accessionYP_003514465 
Protein GI291303187 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.92312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACGG AAGAACTGAT ACTCAGCCAG GCGCAAGAGC TGCGGCGCGG CACCGTCGTC 
CTCGCCTGCC TCGCCCTGCT GAAACAACCC CAGTACGGCT ACGCGCTCCT GGAAACCCTC
AACGACGCGG GCATCCCCGT CGACGGCAAC ACCCTGTACC CCCTCCTGCG GCGGTTGGAG
AAACAGGGCC TGCTGGCCAG CGAATGGAAC ACCGACGAAT CCCGCCCCCG CAAGTTCTAC
AAGACCAGCC CTGAGGGCCT CGCCGTCTGC ACCGGTCTGG TGCGCGAATG GCAGTCCCTC
GTCACCTCGA TGTCCGAACT GACCAAGGAA GAACGATGA
 
Protein sequence
MDTEELILSQ AQELRRGTVV LACLALLKQP QYGYALLETL NDAGIPVDGN TLYPLLRRLE 
KQGLLASEWN TDESRPRKFY KTSPEGLAVC TGLVREWQSL VTSMSELTKE ER