Gene Snas_5712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5712 
Symbol 
ID8886927 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6074454 
End bp6075719 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content71% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514435 
Protein GI291303157 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACTT CACCGTCAGA GGGATGGTTC GCCGCCCAGG CGTCCACCAC GACACCGCCA 
CCCGACCTCA CCGTTGAATG GCGGGGCCGC ACGTACCCCG CCGCGCCGGT CGCTTCCGGC
GCGGCTTTCG AACTGTTCAG TGCCGAAGCC GTCCAGGGGT TCTCGCTCAA CCCGAGGCCC
GGCGCCACCC ATCCTTACCG GACCTTCGTC CATGCCCGCG ACATCCGTGG CGACGGGGCC
CCGGTCCTGT CGGCCCCCGA CGCGCCACTG GTGGTCCCAC TGGCCGACGG GTTGAACCTG
CCCGAGATCC ACCGGCTCTG CCAGTCGCCC TTTGGGGGGC GCGCCGAGGC GGCGCTGGTG
TCCACTGTAC GGGAAAGTGC CCGGATCACC TACGGCACCA AGATGATCAA GTCCCTGTCC
CCGCACCAGG CGGCCCGGCT GCTGCTGTCG CCGCCGTGCG TGTGGGGTGT GTGCTTCCGC
GAACACGACA CCGCGCACCT GCGCACCCCC GAGGAGCGCC GGGTGCTCGA CGGCGATCCG
CATCCCGGCG ACGAGGCCAC CTTCGCGCTG CGCTGGCGCG CCAGTGACCC ACTCGACTAC
GTCGTTCCAT CCATAGAGGA CTATCCCGGG CTGGTGGGCA TGCCCGCCTC CGACCGCCGG
GGTCCCCCGG TGCTGGGCAC CGGTTTCGTC CCGTCAAGCC TGCACCTGAT CCCCGAGTTC
CTCACCGCCG ACTTCGGCGA CCTGCCGTTG CCGGATCGCA GCGAGATCCT CATGTACACC
CCCGAGGGCT CGGAGATCGT CGCGTACCAG TACCTCAGCG AACGGGCGGC CTGGACGCTG
ATGGCGGGGC GGCAGTGGCG GCACCTGCTG TCGGCGCTGC CGGGCATCCG GCCGGGCCAG
GAGTGGTTCC CGGTGCCCGC CGACGCCCAC ATCGGACTGT TCGGTTCCTG CAACGGCCGC
ACCTATCCCG CGGTGGCCGA TCCGCCGCAC GAGTTCCGGG TCCGCGCCAA GTCGGCGGCG
GCCCGGTTCG TGGTCTCCGA CGTGGTCCGC ACGGGTCTGT CGACGGTGTG GCGCGACAGC
GAATGCGCCA TCGCGGGCAG CGACGACGAC TGGGTCAGGC TGCGGTTGCG GTTCCCCAGC
GAGGCAACGG TCGTGGACAC CGGCGCCGAG TGCGTCGAAC GCGGCGTCTA CGAGTGCTGG
GCACCCAGCC GGGAACTGGG CGAGGTCGTC CAGCACGAGT ACCGCTACGC CGGAACCAAG
AACTAG
 
Protein sequence
MATSPSEGWF AAQASTTTPP PDLTVEWRGR TYPAAPVASG AAFELFSAEA VQGFSLNPRP 
GATHPYRTFV HARDIRGDGA PVLSAPDAPL VVPLADGLNL PEIHRLCQSP FGGRAEAALV
STVRESARIT YGTKMIKSLS PHQAARLLLS PPCVWGVCFR EHDTAHLRTP EERRVLDGDP
HPGDEATFAL RWRASDPLDY VVPSIEDYPG LVGMPASDRR GPPVLGTGFV PSSLHLIPEF
LTADFGDLPL PDRSEILMYT PEGSEIVAYQ YLSERAAWTL MAGRQWRHLL SALPGIRPGQ
EWFPVPADAH IGLFGSCNGR TYPAVADPPH EFRVRAKSAA ARFVVSDVVR TGLSTVWRDS
ECAIAGSDDD WVRLRLRFPS EATVVDTGAE CVERGVYECW APSRELGEVV QHEYRYAGTK
N