Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5698 |
Symbol | |
ID | 8886913 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6061318 |
End bp | 6062325 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | Porphobilinogen synthase |
Protein accession | YP_003514421 |
Protein GI | 291303143 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAAA CCGTTGAACC TTCGGGGTTT CCGCGAATCC GGCCCCGGCG GCTGCGCCAG GGGTCCGCGA TGCGCCGCAT GGTCGCCGAG ACCCGGGTGC ACCCGTCCGA CCTGATGCTG CCGATGTTCG TCCGCGAGGG ACTTGACGCG CCGCGTCCCA TCCCCTCGAT GCCGGGCGTC ATGCAGCACA CCCGCGAGTC GCTGCGCAAG GCCGTCGTGG CCGCCGCGCA CGCCGGGGTC GGCGGCGTCA TGATCTTCGG CGTACCCGCC GAGAAGGACG CCACCGGTTC GGGCGCCATC GACCCCGACG GCATCGGCAA CCTCGCGCTG GCCGACGTCA CCGCCGAGGT CGGGGACTCC CTGGTGGTCG TGTCCGACCT GTGCCTCGAC GAGTTCACCG ACCACGGCCA CTGCGGCGTG CTCGCCGCCG ACGGCAGCGT CGACAACGAC GCCACCCTGG AGCGGTACGC CGACATGGCC ATCGCCCAGG CCCAGGCGGG CGCGCACATG CTGGGCGCTT CGGGCATGAT GGACGGTCAG GTCGGCTACG TCCGCACCGC CCTGGACCGG GCCGGTTTCG AGAACACGGG CGTGTTCGCC TACGCCGTCA AGTACTCCTC GGCGGCCTTC GGGCCGTTCC GCGAGGCGGT CGAATCGGCG CTGCAGGGCG ACCGCCGCAG CTACCAGCAG GACCCCGCCA ACGCCCGCGA GGCGCTGCGC GAGGTCGAAC TGGACGTGGC CGAGGGCGCC GACATCGTCA TGGTCAAACC GGGACTGCCC TATCTGGACA TCATCAGGGC GGTGTCCGAG CACGTGACGG TTCCGGTCGC GGCCTACCAG GTCTCCGGCG AATACTCCAT GGTGGAGGCA GCCGCTGCCA ACGGCTGGAT CGACCGGGAA CGCATGATGC TCGAATCACT GGTGTCGATC AAACGCGCCG GGGCCTCGAT CATCGCGACC TACTGGGCCG AGGAAGCCGC GCGGCTGCTG CGCGAGGAAC GTTTCTGA
|
Protein sequence | MSETVEPSGF PRIRPRRLRQ GSAMRRMVAE TRVHPSDLML PMFVREGLDA PRPIPSMPGV MQHTRESLRK AVVAAAHAGV GGVMIFGVPA EKDATGSGAI DPDGIGNLAL ADVTAEVGDS LVVVSDLCLD EFTDHGHCGV LAADGSVDND ATLERYADMA IAQAQAGAHM LGASGMMDGQ VGYVRTALDR AGFENTGVFA YAVKYSSAAF GPFREAVESA LQGDRRSYQQ DPANAREALR EVELDVAEGA DIVMVKPGLP YLDIIRAVSE HVTVPVAAYQ VSGEYSMVEA AAANGWIDRE RMMLESLVSI KRAGASIIAT YWAEEAARLL REERF
|
| |