Gene Snas_5685 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5685 
Symbol 
ID8886900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6048254 
End bp6049384 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514408 
Protein GI291303130 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.421727 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAAGC CCGTGTTCGC CGTCGCCGTC GCGGCACTCG CCCTGACCGC CACCGCCGCC 
TGTGCCGAGA AGGCCAAGGA AAGTGACGAC GGCCCGATCG CGGTGACCGC CACCGACGAC
AGCTGCGAGG TCGCCTCGAC CAAGGCCAAA GCCGGAACCG TCACCTTCAA GGTCAAGAAC
GACGGCAAGA AGGTCACCGA GTTCTACGTG TACGCCAAGG GCGACCGGGT GATGAGCGAG
GTCGAGAACA TCACCCCCGG CAACACCCGC GAACTCATCG TCGAACTGCC CGCCGGGAAG
TACGAGACCG CGTGCAAGCC CGGCATGGTC GGCGACGGCA TCCGGGGCAA GTTCACCGTC
ACCGGCAAGG CCGAGAAGCT GACCGAGGAC GAGAACCTCG CCGACGCCGT GAAGTCCTAC
AAGCGCTACG TCGCCAAGCA GTCGGAGGCG CTGGTCGACA AGACCGGCGA GTTCGTCGAC
GCCGTCAAGG ACGAGGACAT CGACAAGGCC AAGGAACTGT TCCCGATCTC GCGGACCTAC
TGGGAGCGCA TCGAGCCGGT GGCCGAGATC TTCGGCGACC TGGACCCGCG GGTCGACGCC
CGCGAGGACG ACTTCCCCAA GGGCCCCAAG GACCCGGAGT TCGGCGGTTT CCACAAGCTG
GAGTACGACC TGTGGATAAC CAAGGACGTC TCCAAGTCTG GCAAGGTCGC CGACCAGCTG
CTCAAGGACG TCAAAGAGGT CGTCGACCGG GCCGAGAAGG AGGAGCTGAC CCCGCTGCAC
CTGGCCAACG GCGCCAAGGA ACTGCTCGAC GAGGTCGCCA CCTCCAAGAT CACCGGCGAG
GAGGACCGCT ACTCGCACAC CGACCTGTGG GACTTCGCCG CCAACCTGGC CGGTTCGGAG
GCCGCGGTTG CCTCGCTGCG CCCGGTCATC GACGAGAAGG ACCCCAAGCT CGGCAAGAAG
CTGGACGAGA AGTTCGCCGC CGCCGAGGAG GCGCTGGGCG AGCACGCCAA GGGCGACGGC
TGGCGGCTGT GGGACGAGTT GTCCAAGTCG GAGCTGAAGG AGCTCTCCGA CGCCATCAAC
GCGCTCGGCG AACCGGTCAG TGAGGTCGCC GGAGTCGTGT CCAAGAAGTA G
 
Protein sequence
MRKPVFAVAV AALALTATAA CAEKAKESDD GPIAVTATDD SCEVASTKAK AGTVTFKVKN 
DGKKVTEFYV YAKGDRVMSE VENITPGNTR ELIVELPAGK YETACKPGMV GDGIRGKFTV
TGKAEKLTED ENLADAVKSY KRYVAKQSEA LVDKTGEFVD AVKDEDIDKA KELFPISRTY
WERIEPVAEI FGDLDPRVDA REDDFPKGPK DPEFGGFHKL EYDLWITKDV SKSGKVADQL
LKDVKEVVDR AEKEELTPLH LANGAKELLD EVATSKITGE EDRYSHTDLW DFAANLAGSE
AAVASLRPVI DEKDPKLGKK LDEKFAAAEE ALGEHAKGDG WRLWDELSKS ELKELSDAIN
ALGEPVSEVA GVVSKK