| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5645 |
|---|
| Symbol | |
|---|
| ID | 8886860 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6001358 |
|---|
| End bp | 6002005 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | two component transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003514368 |
|---|
| Protein GI | 291303090 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.117498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCGCG TCGTGATCGC CGAGGACCAC GCGCTGCTCG CCGACGGCCT GAACCGGATG
CTGTCGGCCC ACGACTGCGA AGTCGTCGAG ATGGTCGACA ACGGCCCCCG TCTCGCCCCC
GCCCTGATCG AGCACAAACC GGACGTGGCC GTCGTCGACG TCCGACTGCC CCCCACCTTC
ACCGACGAGG GCATCCGTGC CGTCATCGAA GCCCGCGCGA AGGTCCCGGC GTTGCCCGTC
CTGGTCCTGT CGCAGTACGT CGAGCAGCTG TACGCCCGCG AACTGATCCG GGACCGCGCC
GGTGGCGTCG GATACCTCCT CAAGGACCGC GTGTCCAACA TCAGCCAGTT CCTGGACGCG
CTGCGACGCG TCGCCGGAGG CGGTACCGCG ATGGACCCAG AGGTGGTCTC ACAGCTGCTG
GGCGGCAAAC AGTCGAGTCT GGACTCGCTG ACCGGCCGGG AGCGGGAAGT GTTGGCGCTC
ATGGCCGAGG GCCGCACCAA CTCGGCCATC GCCGCGCAGT TGTACGTCAC CGACAAGGCC
GTCGACAAGC ACACCAACAA CGTGTTCCGC AAACTCGGGC TGGCCCAATC GTCGGACGAC
AACCGGCGGG TGCTGGCCGT ACTGGCCTAT CTGGAGGGTC ATTCCTGA
|
|---|
| Protein sequence | MMRVVIAEDH ALLADGLNRM LSAHDCEVVE MVDNGPRLAP ALIEHKPDVA VVDVRLPPTF
TDEGIRAVIE ARAKVPALPV LVLSQYVEQL YARELIRDRA GGVGYLLKDR VSNISQFLDA
LRRVAGGGTA MDPEVVSQLL GGKQSSLDSL TGREREVLAL MAEGRTNSAI AAQLYVTDKA
VDKHTNNVFR KLGLAQSSDD NRRVLAVLAY LEGHS
|
|---|
| |