Gene Snas_5590 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5590 
Symbol 
ID8886805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5940503 
End bp5941024 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514313 
Protein GI291303035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAACA AGACGATCTA CGTGTCCGAC GACGATCTTC CGCTGTTCCA GCGCGCGCAG 
GAACTGGCCG GAGGCAAGTT GTCGACCGCG ATCACGGCGG CACTCCGGCG TTACGTCGAG
ATCGCGGAGG GGCGCATGGA GGGCTTCGAG GAGGTCACCG TGCGGGTGGG CGCCGGAGTC
GGCCGCAAGG TCCGGTTCTC CGGGATACTG CTGGCCGAGT GGGGGCATTC CACCTCCAGC
CGGGTCGACG ACTACCGCGT CTACCGGACC CGCACCGGCA AGTACGCGGT CCACATCGAA
CGGTCCGACG AGCACTACTG GTCGGGGCAG GACGCCGCCA ACTGGGTCGA ATGGGTCCGG
GCCCAGTTCA AGACCGAGCA GACCTGGGGC TACAAGGCGG GTGAGGGAGT CCTCGAGATA
GCCGAGGACC TGGAAGACCT GCGCGACAAG ATCCCCGCCG AGCTGCACGA CATCGTCGCC
TCCGCGGTGG AGCAACCACC CATTGAGGAC TTGGACATCT AG
 
Protein sequence
MPNKTIYVSD DDLPLFQRAQ ELAGGKLSTA ITAALRRYVE IAEGRMEGFE EVTVRVGAGV 
GRKVRFSGIL LAEWGHSTSS RVDDYRVYRT RTGKYAVHIE RSDEHYWSGQ DAANWVEWVR
AQFKTEQTWG YKAGEGVLEI AEDLEDLRDK IPAELHDIVA SAVEQPPIED LDI