| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5516 |
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| Symbol | |
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| ID | 8886730 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 5857880 |
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| End bp | 5859466 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003514240 |
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| Protein GI | 291302962 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.581672 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGTAAAT CACGCGTCAT CGCCGCGGCT ACCGCTCTCG TCGTGGCCGG TTTGGGCCTG
ACGGCATGCA GCAGCGGTGG CGGCGGAAGT GCCGAGTCCG GCGAACTGCG CCTGGGCATC
GACGAACCCA AGAGCTTGAT ACCGGCGAAC ACGACGGAGT CCGAGGGCGC CGCCGTATTG
GAGCGTCTCT ACGTCGGTCT CTACACCTAC AACCCGGACG GATCACTCAA GCCGGTCATC
GCCGAGAGCG AGCCGCAGTC CAAGGACTCC AAGACCTGGA CCATCAAGAT CCAGGAGGGC
TGGGAGTTCC AGAACGGCGA GAAGATCACC GCCGACACCT TCGTGAAGTC GTGGAACTTC
GCCGCCTACG GCGCCAACGC CAACACCGGC GCCGGTTTCT TCTCCAAGAT CGCGGGCTTC
GAGGACGTTC AGGGTGAGAA GCCCAAGTCC AAGGAGATGT CCGGCCTCAA GGCCAAGGAC
GACACCACCC TCGAGGTCAC GCTGACCAAC GAGTTCGTGG GTTTCCCTGT GACACTGGGC
TACCAGGTGT TCGCGCCGGT CGCCGACGCG TGCCTTGAGG ACATCAAGGC CTGCAACGAC
AAGCCGATCG GCAATGGACC GTACGAGATG GACGGTAAGT GGAAGCACAA GGAGTCCATC
ACCGTCAAGC AGTGGAAGGC CTTCAAGGGC GAGAAGCCCA ACATCAAGAA GACCTTCTTC
AAGATCTACA CCGGTGACTC CACCGCCTAC CCGGACTTCG AGGCCGGGAA GATCGACATC
TCGGGCATCC CGTCGGAGAA GTACGAAGAG GCCAAACAGG AGTACGGCGA CGACATCATC
CAGGAGAAGA CCGCCAACAC CTGGGGCATG GCCTTCCCGT CCAACGACAA GAACTACAAG
GACCCCGACG TCCGCAAGGC GTTCTCGATG GCGATCGACC GCGACGCCTA CATCAAGGGC
ACCTTCCAGG GCCGCTACGA GACCGCCAAC TCGTGGACCC CGCCGATCAT CCCGGGCTAC
AAGGCCGACA CCTGCGGCGA CACCTGCGTC TTCAACAAGA AGGAGGCCAA GAAGCTGTTG
GACTCCACCG ACTTCCCGCA GGACGAGAAG GTGGTGCTGT GGACGACGCC GGGACCGGGT
GAGGACTACA CCAAGAAACT CGGCGACATG ATCAAGGACA ACCTGGGACT CGAGTACGAA
CTGGAGTCGC TGGAGTGGGC CGACTTCCTG CAGAAGCGGA CCGACCACGA GATCACCGGT
CCGTACCTGA GCGGCTGGGT TCCCGACTAC CCGCTCAACG AGGACTACCT GGCGCCGCTG
TACGGCAACG GTCCCGAGAA CAACTTCGGT TACTACAACA AGGACTTCGA GGCGGCCCTG
CAGGCGGGCG ACACCGCCAA GGACCTCGAC GCCGCGGAAC TGAAGTACCA GGAGGCCGAG
GAGATGCTGG CGGACGACCC GCCACTGGCT CCGATCTGGA TCGAGTCGAC CGCCACACTG
CTGGGCGACC GGGTCGACAC CAAGACGTAC AAGCGCAACC CGATCCTGGG CGGCTTCGAC
ATCTACAAGC TGAAGCTGAC CGAATAG
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| Protein sequence | MRKSRVIAAA TALVVAGLGL TACSSGGGGS AESGELRLGI DEPKSLIPAN TTESEGAAVL
ERLYVGLYTY NPDGSLKPVI AESEPQSKDS KTWTIKIQEG WEFQNGEKIT ADTFVKSWNF
AAYGANANTG AGFFSKIAGF EDVQGEKPKS KEMSGLKAKD DTTLEVTLTN EFVGFPVTLG
YQVFAPVADA CLEDIKACND KPIGNGPYEM DGKWKHKESI TVKQWKAFKG EKPNIKKTFF
KIYTGDSTAY PDFEAGKIDI SGIPSEKYEE AKQEYGDDII QEKTANTWGM AFPSNDKNYK
DPDVRKAFSM AIDRDAYIKG TFQGRYETAN SWTPPIIPGY KADTCGDTCV FNKKEAKKLL
DSTDFPQDEK VVLWTTPGPG EDYTKKLGDM IKDNLGLEYE LESLEWADFL QKRTDHEITG
PYLSGWVPDY PLNEDYLAPL YGNGPENNFG YYNKDFEAAL QAGDTAKDLD AAELKYQEAE
EMLADDPPLA PIWIESTATL LGDRVDTKTY KRNPILGGFD IYKLKLTE
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