Gene Snas_5461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5461 
Symbol 
ID8886672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5791974 
End bp5793077 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514186 
Protein GI291302908 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.898004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACTT TCGACGACCG CGCCCTCAAC CGAGCCCGGC TGCACCGTCA ATGGCTGACC 
GAGCGCCGTG ACGCCACTCC ACTGGAGACG ATGGAACACC TGGTGGGAAT GCAGGGACAG
CTGGGCGACC CGCCCTACTT CCAGCTGTGG AGCCGCCTGA ACGACTTCAC CACCGACGAC
CTGTCCACAC TGCTCGAAGA CCGCCGCGCC GTGCGGGTGG TGCTGATGCG CGGCACCATC
CACCTGGTCT CGGCCCGCGA CGCCCTGACA CTGCGGACCC TGGTCCAGCC GTACCTGTCC
AAGACCGTCT TCAACGGCAG CGAATACGGA AAACGCATCC AGGGCGTCGA CCCCGAGGCA
CTGGTCGAAG CCGGACGGCG ACTGCTGGCC GACAAACCCC TGCACGTGGA CGAACTCGGT
GCCGGACTGG CCGAACAGTT CGACGGCTAC GCGGGCGGCG ACCTGGCCTA CGGGCTGCGC
GGCCTGATGC CGCTGATCCA GACCCCGCCG CGCGGCGTGT GGGGGCAGGG CGGCGGCCTC
ACCTACGCCT CCACCGGGCA GTGGCTGGGC GCCGACCCCG ACACCGACTG GGACGCCGCG
CTGGACGCGG CGATCCCGCG CTACCTCGCC GCCTACGGCC CCGCGACCAT TCAGGACTTC
CAGACCTGGT CGAGCCTCAC CCGCACCGCC CCGGCCTTCG CACGGCTGCG GGACCGGCTG
ATCGTCCACC GCGACGCGGC CGGCCGGGAA CTGTACGACC TGCCCGACAT CGAACTGCCC
GACCTGGACG GACCGCTGAA ACCCCTGCTG CTGGGCGGTT TCGACAACAT CCTGCTGTCC
CACAGGGAAC GCGAGTTCGT GATCTCCAAA CCCGCGCAGA AGAAGGTCTT CCGGCAGAAC
GCGATGATGA AGGGCACCAT CCTCATCGAC GGTCTCGTCG TCGGCACCTG GTTCACGACA
CTCAAGAAGA AGACCGCGCT TCTCACCTTC GAACCCTTCG AGTCCCTGTC GGCCAAGAAC
CGGCGGTACC TGGAGGGGGA AGGCGAGCGG CTGCTGGACT TCGCCGCCGG TACCGCCGAA
ACACGCACCG TCGAGTTCAC CTGA
 
Protein sequence
MKTFDDRALN RARLHRQWLT ERRDATPLET MEHLVGMQGQ LGDPPYFQLW SRLNDFTTDD 
LSTLLEDRRA VRVVLMRGTI HLVSARDALT LRTLVQPYLS KTVFNGSEYG KRIQGVDPEA
LVEAGRRLLA DKPLHVDELG AGLAEQFDGY AGGDLAYGLR GLMPLIQTPP RGVWGQGGGL
TYASTGQWLG ADPDTDWDAA LDAAIPRYLA AYGPATIQDF QTWSSLTRTA PAFARLRDRL
IVHRDAAGRE LYDLPDIELP DLDGPLKPLL LGGFDNILLS HREREFVISK PAQKKVFRQN
AMMKGTILID GLVVGTWFTT LKKKTALLTF EPFESLSAKN RRYLEGEGER LLDFAAGTAE
TRTVEFT