Gene Snas_5440 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5440 
Symbol 
ID8886649 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5770925 
End bp5771848 
Gene Length924 bp 
Protein Length307 aa 
Translation table11 
GC content55% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514165 
Protein GI291302887 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.380513 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAAGG ATTTCTACAC TCTCAATACC GTAGATGTGA ATCAGTCGGC GTTTTTCGAG 
AAGGTACTCG GAGACATGGA GGATCGTGCA GCCCGCATCA TCCGTTTGGT GATTGAAGAT
GACGCATGGC CACTGGATCC GAAGTCGCGT GCTGTACTCG CAGAATTTGC TGCTGCCCAA
TATTTCCGGG GCCCAAACCA GAGACGGCAC ACCGAGCAGT TCGCTGCTAC CTTCTTGAAA
GCCGAAATCA GCCTGCAAGG CAGAGAAGGT GTAGTCGCAT ACTTCAAGGA TCGGCACGGG
CGCGAGATCA CTGAGAAAGA AGCTGATCGT CTCTGGGCTC AGGCAACCAC TTCCAATGGC
CCGCCGATCC GCGTTTCGGC TCGCACGCAC ATGGAACAAC TGGCGCGACT TCTACCGCAG
ATGATCCGCT ACTTCATCGG CAGGCCGTGG CTTCTATTGC GATACAGTGG ACAGAGTCTA
TGCACATCCG ACACCCCAGT CAGCATCATT CCGCGCAATG ACCATCCACC TGAGATGGGG
GTGGGGCTTA TGAATGCTTG GGGGCTGGCC TTGCCACTCT CACGTGAGGT CGGGTTGCTT
ATGGGAAACC CCGGCCCACT CATGCGAGCC CTTTCATACG AAGCAGTTGC CGCAGGCGTG
GCTGATCGAC TGGAGCGTCC CAGCCAACTG CCCCCTTCCT TCTTCAACAC CGTGACAATC
GCCAACGCAC GACGCTGGAT CTTCTGTCAT CCCAGAGACA AATCCATGAT CCCTAGTGAC
CTTCCCGAGC CATGCGACCA AGAAATTCTG ATGCCCGTTG ACGACTTCGT CGAACTTGGC
CAACGGATCC GCAGCTCTAC CAAGCGGAAT CCAGACAAGT TACTGATTAC AAGGTGCTTG
ACCTCAGTGC CTCAACCAAA ATGA
 
Protein sequence
MHKDFYTLNT VDVNQSAFFE KVLGDMEDRA ARIIRLVIED DAWPLDPKSR AVLAEFAAAQ 
YFRGPNQRRH TEQFAATFLK AEISLQGREG VVAYFKDRHG REITEKEADR LWAQATTSNG
PPIRVSARTH MEQLARLLPQ MIRYFIGRPW LLLRYSGQSL CTSDTPVSII PRNDHPPEMG
VGLMNAWGLA LPLSREVGLL MGNPGPLMRA LSYEAVAAGV ADRLERPSQL PPSFFNTVTI
ANARRWIFCH PRDKSMIPSD LPEPCDQEIL MPVDDFVELG QRIRSSTKRN PDKLLITRCL
TSVPQPK