| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5435 |
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| Symbol | |
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| ID | 8886644 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5765432 |
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| End bp | 5766979 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | |
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| Product | Type IV secretory pathway VirB4 protein-like protein |
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| Protein accession | YP_003514160 |
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| Protein GI | 291302882 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.62909 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACTGA TCAAACCCAC ACCCGGCAAG AAACCCACCA AACCCGGACG GCCCGAAAAG
GCCGCGCCGC TGCCACAAGC CGATCTCGCC GATCTCCTGG GACTGAGCAC CGCTGCGGCT
TCCACGAAAG AACTGGTGCC GCAACAGAAC GACCGGGACC GCCCCAAGGC CCCGTCGATG
CCTGTTCCAC CGCGTCGCGG CTACGCCCGC CCGTTCTGCG GTCGAGCACC GCTGCCTCCG
GCTGTGCCTG TGGTCCGGGG CTCGACCGGC CAGCTCTCGG GCCTCTACCC ATTCCTTTAT
GGCCACTCAC TGCCTCCGGT TGGCGTCTAC ATGGGAATCG ACTGCCTGTC GGGAGCGGCG
TTCAGCTGCC ATCCGATCGA ATGGCTGCAC CACGGCCTTG TCACGAACCC GAACATTCTG
GTGACCGGTG TTCCCGGCGC CGGCAAATCC GCCACCGTCA AAGCCCTCGC CTTGCGATTG
ATGGCCTACG GCGTCAAGAC GTTCGTTCTC GGCGACCTGA AGAACGAATA CGCCGCACTG
GCCCGAACCT TGGGCGTGGA ACCGGTGGAG CTGGGCCCGG GACTTCCCGG TCGCGTCAAC
CCTCTCGACT CCGGCCCGTT GGGTCGAAAC CTGCCGCCCG CGGGCCCGCA ACTGGATGAG
CGACTGGCCG AGATCCACCG GCGCCGCATC ACCTTGCTGT CGTCGCTTGT GGAGATGCGG
CTGCACCGCC CACTGACACC CACCGAGGAA GCCGCAGTCT CGCAAGCCAT CCGCCACGCC
GCCGGCATCG CGACAGGCAC GACCTATCTG ACCGACCCCA CCATCCCCGA CGTCTGGCGG
CTGTTGCGCG ACCCGGTCGA CGACATGGCC ACCGAGCTAC GCACCGCCGG TGCCACCGAC
CTTCGCGAAC GAGTGCGACC CGTGGCCGAC GCCATCGGCA ACATGATCAC CGGCAGCCTC
TCGGGATTGT TCGACGGCCC CACCACCGTG GCCCCCGACT TCACCGCACC GATCCAAACC
GTCGACATCT CCCGGCTCGA CGGCCGCGGC GACGACACCG TGGCCATGAT CCTGGCGTGC
GTCTCCTCCT GGGGACAAGC CGCCATCGAC GACCCGAACG GACCGGTGCG AATGGTCGTG
CGCGACGAAC TGTGGCGGGC GATGCGCATC CCCGCCATGG TGAAGAAACT CGACGCCGAC
CTACGGCTGT CGCGCTCCCA AGGCACGATC CAGATGTTGT GCAGCCATCG GCTATCCGAC
TTCGAAGCCG TCGGATCGGC CGGATCCGCT GAGGTCGCCA TCGCCAAATC TTTGATCGGC
TCGTGTGACG TGCGAGTGTG CCTGGCCCAA GACACCGCGC CCCTGAACAT CACGCGCGAA
GTCATCGGAC TGACCGACAC CGAAGCGGCC CACATCGCCA GCTGGGGCGC CGAACAACGC
GGACGCGCCC TGTGGAAAGT CGGCCGTACC AGCTCCAGCA TCGTCCACAC AGTTCTGTCT
CCTGTCGAGT TGGAACTGTT CTGGACCAAC GAACGCATGA CCGTCTAG
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| Protein sequence | MTLIKPTPGK KPTKPGRPEK AAPLPQADLA DLLGLSTAAA STKELVPQQN DRDRPKAPSM
PVPPRRGYAR PFCGRAPLPP AVPVVRGSTG QLSGLYPFLY GHSLPPVGVY MGIDCLSGAA
FSCHPIEWLH HGLVTNPNIL VTGVPGAGKS ATVKALALRL MAYGVKTFVL GDLKNEYAAL
ARTLGVEPVE LGPGLPGRVN PLDSGPLGRN LPPAGPQLDE RLAEIHRRRI TLLSSLVEMR
LHRPLTPTEE AAVSQAIRHA AGIATGTTYL TDPTIPDVWR LLRDPVDDMA TELRTAGATD
LRERVRPVAD AIGNMITGSL SGLFDGPTTV APDFTAPIQT VDISRLDGRG DDTVAMILAC
VSSWGQAAID DPNGPVRMVV RDELWRAMRI PAMVKKLDAD LRLSRSQGTI QMLCSHRLSD
FEAVGSAGSA EVAIAKSLIG SCDVRVCLAQ DTAPLNITRE VIGLTDTEAA HIASWGAEQR
GRALWKVGRT SSSIVHTVLS PVELELFWTN ERMTV
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