Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5417 |
Symbol | |
ID | 8886626 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5748756 |
End bp | 5751662 |
Gene Length | 2907 bp |
Protein Length | 968 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Lantibiotic dehydratase domain-containing protein |
Protein accession | YP_003514142 |
Protein GI | 291302864 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.944486 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGGCC AACTGCTGAT GACCAGCCAC AGCACGCGAC GCGGGACGGC ATTCACTACG CCGTTCCGCG TCGCGGATCC CCGGTCCGGG CTGGCCCGGC TTCCGCTGTT GCACAACGAT CCCAGCCCGA ACACCTCGAT AGATCCTGTC GTGGCCGAGG GGATGTTCCT TTGCTCCGAG ATCCACGCCG ATGTCTCCCC CGACAGCGCC GAGCAGCGCC GCGCCACCGA ACGGGCATTT GACATCCGCG CACGGCGACG CACCACCCCG CAAGGCGTGT TCGCGGGCGT CACCGAACTG GACATCAACG TCGCGGCGTC GACCCTGTCC GTCCGCACCG AGCACAAAGT CCGGTCGTAC CCCAATCCCG TGTGGGTCCA TGAGATCGGT GATCGCGTGC TGGACAGCGC CGCCGTGTTG CACGCGCTGA CCTATACGAC CAACAATCTC GCGGCGCGGC GCGGTGACCG CCTGGATGTC CAACGCCCCT CCAGCGACCC GCGAACCGGA CCGCAGCGCA TGAGCGTTCG CCGCACCGAG GCCGTCGAAG TCGTCCTGGA CGTCGCTCGG TCCGGTGCGT CGTGGAAGCA GATCACCACC GCGCTGACAC AACGGTGGCC GAGCATCCAG GACACCACGG TTGAGGTGGT CATGCGGCAG CTGACCCGCA GCGGTTTCTT GTTGACCGAC CTGGATCCCG TCGATACCTG CACTGACCCG CTCGGTCACC TCCTGGCCAA ACTCCCGGCG TCCGAACCGG TACGCGAACC GCTGTCGTGG CTGCGCGCCG CGCTGGCCGA AGCCGATGCA CACCCGCCCG GCCACCCAGC ACGTATGGCC GCGCTCAAGA CCGCGCGCAA TATCGCCGAC GACCTGTTCG CGACCTGGCG ACCCATCTGC ACCGACACCG CGATGAACGC CCACATCTCC ATCCCGGCAC GCGTGGCCGA AGAGGCCGCT CAAGCCGCCA ACGTCTTGTG GCGCATGCCG CCTCGGCATG ATCCGCTGGC CGAATGGCAC GAACGCTTCC TCCACCGCTA CGGCACCGGC CGTCTCGTGC CCCTGCTGGA GGTGTGCGAC CCCGTCACCG GATTGGGTTG CGACCCCGGC AACACCGAAG TAGTGCCCCC TCCGGAATCC ACTGAAGCCT TGGCCCGGCT GATCAACGTT GCGTTGACCT CCAACAAGAT GGAGGTACAG CTGGACGCGG CAACGATCAC CGCGCTCGAC CAGCGCCGCC CCAGTGACGC TTGCGAACCT TCGGCTGAGC TGTACGCGAC GGTCGTTGCC CGTGACGAAC ACGACCGCGA CGCCGGGAAG TTCGTCCTGG CCGTCACCAA CATGGCTTCA CCGGCCGGGT CAACTCGCGC CCGGTTCGCC GGCCTGCTCC CCGACGCCTC CGTTGCGAGC GACCCAGGGC ACGGCACCAT GACCGCCGAA CTGGCATTCC GGCCCACGTC CCACACCGTC GCGGCGCTGA CCGGCCGCGC GGACAACGCG CCGTGGCGCA TCCCGATCGG CACGATCCCC CAGTCCGGCG ACCTCGCGCT GGACGACCTC GCTGTGGTCT CTGACGGCGC CCGCCTGAGG CTTTGGTCCA CACAGAACAA CCGGCCGGTT CGGCCCGTCC ACCACAACCA GGTAGGCCAC CACCTGATGC CACCCGTGGC CGCGTTCTTG TGCCTGCTGG GCCAGCACGG CAACACCGGG TTGAGCCCGT GGACATGGGG ACCATTCGAG CGTGCCCCCT TCACCCCACG GGTGCGCTTC CGCGACGTCA TCCTGTCCCC GGCCCGCTGG CGACTCCCCG AAGAGGTCCG AGACGCCGCC ACCGACCGGT CGACATGGGC CACGGCACTG CGACGCTGGC GCACCAGCGC CCGGCCCGCT CCACCGGCCA CCGTCGTCAT CGACACCAGC GACCGAAAAC TTCCCCTTGA CCTCGATCGT GGCGACGACC GCGAACTCCT GCGCCGCTAC GTCAACCGAG ACGTGACCGC GGTGACCGAA CCGCCTGGCG GCCCCGACGC GGTTCAGGCC GTGGCCCTCG GAGAAAGAGG GCACCACGTC TTGGAGATTG TCGTGCCGGT CTCCGCTTCG CACACCGAGG AGACCGCACC ACCGGCGCCG GCGCTGGCAC GCCAATCCAG ACACAGCGTG TTCACGCCGG GGAGCGAATG GCTGTCGCTG GCCATCGATG CTCCACCGTC GACTCAAGAC GCCGTGCTGG CTCGCCTCGC CGACGCCGCG CACCACGCGA CCGGGCTGTG GCACCGATGG TTCTGGATTC GCTACCACAC TCCCGCGCGC GGACCCCACC TTCGAGTCCG GTTCCGCGGC GACCCGAGGC CCCTGGGCGG GCAACTACTC CCGCTGTTGG GCGACACCTG TGCGAACCTG ACCACTGATG GTCTGTCCGG TGGATTCGGG ATCGAGGAGT ACCGCCAAGA GATCGAACGC TACGGCGGCG AGCACGCGAT CGAATACGTC GAAGACACCT TCCACCACGA CGCCAACCTT GTCGCACATC TCCTGGCCGA AAGCTCCGAC CCGGATGAGC GCCTGGCGTT GACCGCCGCC TCGGCCGCCG AGATCGTCCG CATCGTCGCC GACGGGAACC GCGCGGCTCT GGTTCCGCAC CGTCTGGAGA GGGCAGACCG TCGCACCCAT GCCCGTGTCC GGCCTCGCGC CCGCTCCATC GATGACGGCA CGCCCGCTCA TCGGCCACTG TGGTATGAGC GCACCGCTGC CCTGACGGCA TACCGCGCGG TCCTGCCACC GGACCGCCGC ATCGACTGCG CTTCATCGCT GATTCATATG CACGCCAACC GTCTCCTGGG CGACAACCAT CGTGAGCGCA TCGCACGCGC ACTCGCCGTA GATCTCATCG CGCGGGAGGC CCCATGA
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Protein sequence | MLGQLLMTSH STRRGTAFTT PFRVADPRSG LARLPLLHND PSPNTSIDPV VAEGMFLCSE IHADVSPDSA EQRRATERAF DIRARRRTTP QGVFAGVTEL DINVAASTLS VRTEHKVRSY PNPVWVHEIG DRVLDSAAVL HALTYTTNNL AARRGDRLDV QRPSSDPRTG PQRMSVRRTE AVEVVLDVAR SGASWKQITT ALTQRWPSIQ DTTVEVVMRQ LTRSGFLLTD LDPVDTCTDP LGHLLAKLPA SEPVREPLSW LRAALAEADA HPPGHPARMA ALKTARNIAD DLFATWRPIC TDTAMNAHIS IPARVAEEAA QAANVLWRMP PRHDPLAEWH ERFLHRYGTG RLVPLLEVCD PVTGLGCDPG NTEVVPPPES TEALARLINV ALTSNKMEVQ LDAATITALD QRRPSDACEP SAELYATVVA RDEHDRDAGK FVLAVTNMAS PAGSTRARFA GLLPDASVAS DPGHGTMTAE LAFRPTSHTV AALTGRADNA PWRIPIGTIP QSGDLALDDL AVVSDGARLR LWSTQNNRPV RPVHHNQVGH HLMPPVAAFL CLLGQHGNTG LSPWTWGPFE RAPFTPRVRF RDVILSPARW RLPEEVRDAA TDRSTWATAL RRWRTSARPA PPATVVIDTS DRKLPLDLDR GDDRELLRRY VNRDVTAVTE PPGGPDAVQA VALGERGHHV LEIVVPVSAS HTEETAPPAP ALARQSRHSV FTPGSEWLSL AIDAPPSTQD AVLARLADAA HHATGLWHRW FWIRYHTPAR GPHLRVRFRG DPRPLGGQLL PLLGDTCANL TTDGLSGGFG IEEYRQEIER YGGEHAIEYV EDTFHHDANL VAHLLAESSD PDERLALTAA SAAEIVRIVA DGNRAALVPH RLERADRRTH ARVRPRARSI DDGTPAHRPL WYERTAALTA YRAVLPPDRR IDCASSLIHM HANRLLGDNH RERIARALAV DLIAREAP
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