| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5412 |
|---|
| Symbol | |
|---|
| ID | 8886621 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5746173 |
|---|
| End bp | 5746640 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LuxR family |
|---|
| Protein accession | YP_003514137 |
|---|
| Protein GI | 291302859 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.207706 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.221863 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAACTG TCAACGCACC TGTCCCTACA TACGCCTTGG CCAAACGTCA GCCGGCCGCC
ACCGACCCCA AGGTGTGGAC ACGGCTCGGT GTCCACATCA CCGACCTGCA CAACGAGGCT
CAGGGACTGC GCCGCCCCGA ACGACTAACG CGGGCGGCCC TCGGCGCCGT CACGCTGCTG
CGCTCGCTCG GTGTCCGCAT TGAACTGCCC AGCGGAGAAT TGCCGACACG GGATCTGCCC
AGCGCACTGT CGCGGCCGAA ACCCTCAGGG ACGTTGACGC TGACCGACCG CGAACGTGAA
GTGCTCGGTG GCATGGCCGA AGGCAAGAGC AACGCCGAGA TCGGACGCGA ACTGTTCGTC
ACCGAGGACA CCATCAAGAC CCACGCGCGG CGGCTGTTTC GCAAGCTCGA CGCCCGCGAC
CGCGCCCACG CCGTCAGCCA GGGCTTCCGT CTGGAGCTGC TGACATGA
|
|---|
| Protein sequence | MTTVNAPVPT YALAKRQPAA TDPKVWTRLG VHITDLHNEA QGLRRPERLT RAALGAVTLL
RSLGVRIELP SGELPTRDLP SALSRPKPSG TLTLTDRERE VLGGMAEGKS NAEIGRELFV
TEDTIKTHAR RLFRKLDARD RAHAVSQGFR LELLT
|
|---|
| |