Gene Snas_5404 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5404 
Symbol 
ID8886613 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5739992 
End bp5740600 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514129 
Protein GI291302851 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.394336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGTA TCGGAGATCT GATCATGTGC GCCTACAGCG AAGGCGACTG GTGCCTGGGC 
CACTATGCCG GGACGGTCGG CGGCCGGATC CACGCCACGG TCACCAACCC ACTCAACGCG
CCAGCCCGCG TCGGAGATCT GGTGTCGGTA CTTCCGGGTT TCGCCCGCGC CGCGCAAGGC
GAGAACGACG TGATGCCGGT GGACATCCAC CGCAAGCTGC GCGGCCACCG GTTCTACCCC
ACGATGGCGC AGTTGGCGAA ATTGCCCGAC CTGTACGCCC AAGAGTCCGT TCCCGCAGAA
GACAGCACCG TCCACTACCG GTACTTCGCG CCGTGGGGAA CCTGGTGGAT CACCGAATTC
GGCCGCGACC TCGATGCGGG CCAGGCTTAC GGGTACGCCC GACTTGCCGA CGACCCCGCC
ATGGCCGAGT GGGGCACAAT CTGGCTACCC GAAATCGAAC GCCACCTCGC CACCACCCCA
CTGCGCAGCC CTGGAGGCCG CCCCATCGCC GCAGTCCCGC TCCTCGTCGA AAGCGACTGC
CACTTCCGCC CCGGCAAAGC CCGAGACGTC ATTCCCGACC TTGCCGACAA CGAACAAGAT
GCACAGTGA
 
Protein sequence
MFRIGDLIMC AYSEGDWCLG HYAGTVGGRI HATVTNPLNA PARVGDLVSV LPGFARAAQG 
ENDVMPVDIH RKLRGHRFYP TMAQLAKLPD LYAQESVPAE DSTVHYRYFA PWGTWWITEF
GRDLDAGQAY GYARLADDPA MAEWGTIWLP EIERHLATTP LRSPGGRPIA AVPLLVESDC
HFRPGKARDV IPDLADNEQD AQ