Gene Snas_5403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5403 
Symbol 
ID8886612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5739085 
End bp5739906 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content60% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514128 
Protein GI291302850 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.286654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTACG ATGCCCCTGG TCCATACCAA CCCCGCAACA ATCCTCATGA GATTGTGCAC 
ATCCCGTTCC ACGGCCGTGT CATCCACACC GCGCTCAGCG CGGACGGTGA GCCGGTGGTC
ATCCTGAAAC CGACCGTCGA AGAGATCGGG CTGGACTTCT CGGCTCAGCT CGAAAAGCTC
AAGACCAGAT CGTGGGCCGT CGTGACCGAA ACACTCATAA GCGGCGCAGA CGGCAAGATC
TACCCGATGG TCAGCGTCAA CCTCGAAACC TGGTCGATGC TGTTGGCCAA CGTCGACGAG
AACAAGGTCA TCCTCGCCGC GCGGCCCATC GTGATCGCCT ATCAACGCGA AAGCGCCAAG
GCACTGCGGG ATTACTGGAC CCGAGGCGTA GCGGCCAATC CGCGCTACAG CCCCCGCGAG
AAGGCGGAAA TGCTGGCAGC ACTGAAGGGA ATCGTGGATT CAGGGTTCCT GGAGGCCAAG
GGACGGCAAC TGGTGGGACG GACTCTTGGC GAGGTCCCAG AGTTCGACGA GCAAACCAAG
CCGTTGACAG TGGCGATGTA CCTGAACAGC CTCGGGCTGA AAAGCTCGGC GATCCGCAGG
GTACAAAGTC AGTTCGGTAA GCAGCTCAAG GCCCGCTACC GCGACCAGTA CGGTTGCGAG
CCACCACAGA TGGAAGATCT CGTGAACCGC CACATGATCA AGGTTGCCCA GTACCAGGAG
CAGCACCGGC CCTTGTTCGA CGCTGTGTGG CGGTCGATGA ACCGCGACGA CGGCGGAACC
ACCAGGCCGA AGAACCGACC CGACAAAAAC CGACCAAAGT AG
 
Protein sequence
MSYDAPGPYQ PRNNPHEIVH IPFHGRVIHT ALSADGEPVV ILKPTVEEIG LDFSAQLEKL 
KTRSWAVVTE TLISGADGKI YPMVSVNLET WSMLLANVDE NKVILAARPI VIAYQRESAK
ALRDYWTRGV AANPRYSPRE KAEMLAALKG IVDSGFLEAK GRQLVGRTLG EVPEFDEQTK
PLTVAMYLNS LGLKSSAIRR VQSQFGKQLK ARYRDQYGCE PPQMEDLVNR HMIKVAQYQE
QHRPLFDAVW RSMNRDDGGT TRPKNRPDKN RPK