Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5403 |
Symbol | |
ID | 8886612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5739085 |
End bp | 5739906 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | |
Product | hypothetical protein |
Protein accession | YP_003514128 |
Protein GI | 291302850 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.286654 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTACG ATGCCCCTGG TCCATACCAA CCCCGCAACA ATCCTCATGA GATTGTGCAC ATCCCGTTCC ACGGCCGTGT CATCCACACC GCGCTCAGCG CGGACGGTGA GCCGGTGGTC ATCCTGAAAC CGACCGTCGA AGAGATCGGG CTGGACTTCT CGGCTCAGCT CGAAAAGCTC AAGACCAGAT CGTGGGCCGT CGTGACCGAA ACACTCATAA GCGGCGCAGA CGGCAAGATC TACCCGATGG TCAGCGTCAA CCTCGAAACC TGGTCGATGC TGTTGGCCAA CGTCGACGAG AACAAGGTCA TCCTCGCCGC GCGGCCCATC GTGATCGCCT ATCAACGCGA AAGCGCCAAG GCACTGCGGG ATTACTGGAC CCGAGGCGTA GCGGCCAATC CGCGCTACAG CCCCCGCGAG AAGGCGGAAA TGCTGGCAGC ACTGAAGGGA ATCGTGGATT CAGGGTTCCT GGAGGCCAAG GGACGGCAAC TGGTGGGACG GACTCTTGGC GAGGTCCCAG AGTTCGACGA GCAAACCAAG CCGTTGACAG TGGCGATGTA CCTGAACAGC CTCGGGCTGA AAAGCTCGGC GATCCGCAGG GTACAAAGTC AGTTCGGTAA GCAGCTCAAG GCCCGCTACC GCGACCAGTA CGGTTGCGAG CCACCACAGA TGGAAGATCT CGTGAACCGC CACATGATCA AGGTTGCCCA GTACCAGGAG CAGCACCGGC CCTTGTTCGA CGCTGTGTGG CGGTCGATGA ACCGCGACGA CGGCGGAACC ACCAGGCCGA AGAACCGACC CGACAAAAAC CGACCAAAGT AG
|
Protein sequence | MSYDAPGPYQ PRNNPHEIVH IPFHGRVIHT ALSADGEPVV ILKPTVEEIG LDFSAQLEKL KTRSWAVVTE TLISGADGKI YPMVSVNLET WSMLLANVDE NKVILAARPI VIAYQRESAK ALRDYWTRGV AANPRYSPRE KAEMLAALKG IVDSGFLEAK GRQLVGRTLG EVPEFDEQTK PLTVAMYLNS LGLKSSAIRR VQSQFGKQLK ARYRDQYGCE PPQMEDLVNR HMIKVAQYQE QHRPLFDAVW RSMNRDDGGT TRPKNRPDKN RPK
|
| |