Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5390 |
Symbol | |
ID | 8886599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5722191 |
End bp | 5723588 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | pyridine nucleotide-disulfide oxidoreductase dimerization region |
Protein accession | YP_003514115 |
Protein GI | 291302837 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.685666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCATT TCGACTTGAT CATTCTCGGC TCCGGTTCCG GCAACTCGAT CCTGGACGAA CGGTTCGCGG ACTGGAAGGT CGCGATCATC GACAAGGGAG TCGGCTCGCG CGGGTCCTTC GGTGGTACCT GTTTGAACGT GGGATGCATT CCCACCAAGA TGTTCGTGCA CACCGCCGAT GTGGCGGGCT CGCCGGAAGC CGGGGCCCGG CTCGGGGTGG ACCTGGAGCG CCGAGGCGTG GACTGGCCGG CGGTGCGAGA CCGGATCTTC GGGAGGATCG ACCCGATCGC CGACGCTGGG GAACGGTTTC GCGCCGAGGA GCAGCCCAAT GTCCGGCTGC TGCGGGGGAA CGCGCGGTTC ACCGGCCTGC GGAAGCTGAG CGTCGAGCTT CCGGACGGGG ACGTGACTGT CAGCGCTGAC CGCGTCGTTG TCGCAGCCGG GAGTCGGCCG CGGTTGCCGC CGATTCCCGG TCTGGCCGAG TCCGGCTTTC ACACCAGCGA TTCGGTCATG CGGCTGGAAC GGCTTCCTGA GCGCATGATC GTGCTGGGAT CCGGCTTCGT CGCTGCCGAA CTGGCGCACG TCTTCGCGTC TTTCGGGGTG GCCGTGACGG TCGTGGCCCG GTTCGGCGCA CTGCTGCGCG GTGAGGACGC GGCGATTTCA CAGCGGTTCA CCGAACTGGC GAGTCGGCAC TGGGACCTGC GGTTGAACCG CAAGGTCGTG GGAGTCGAAC GCGACGGCGA GGTGGTCCGG CTGCGGCTGG ACGGGACAGA TGGCGCCCAG ACCATCGAGG CGGAGGAACT GCTGGTGGCC GTCGGGCGAG TCTCCAACGC CGATCAGCTC GATGCCACCG TCGGAGGGCT GGAGTTGACG CGTCACGGTC AGATCGCCGT GGACGCGCAC CAGAAGACCA CGGCTGAAGG CGTCTGGGCG CTGGGCGACG TCAGCTCGGA GCATCAGCTC AAACACGTGG CCAACCACGA GGCCCGTATC GTGCAGCACA ACCTGCTGCA CCCACACGAA CCGATCCGTT CGGATGGACT GGTGGTGCCG CACGCAGTGT TCAGTTCGCC GCAGATCGCC TCGGTCGGGG TCACCGAGGA ACAGGCGCGA TCGCGGGGGC TGGACTATGT CAGCGCGGTG CAGGACTACG CCGGAATCGC CTATGGCTGG GCCATGGAGG ACACGACCGG CTTCGCCAAA CTGCTGGCCG AACCGGACAC CGGGCGGCTG CTGGGCGCTC ACATCATCGG GCCGCAGGCC GCCACCTTGA TTCAGCCGCT GGTGCAGGCC ATGCAGTTTG GCCTGGACGC GCGCACCATG GCGCGAGGCC AGTACTGGAT TCATCCGGCG ATGCCGGAAT TGATTGAGAA CGCCTTGCTC AAACTCCCGC TGCGATGA
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Protein sequence | MSHFDLIILG SGSGNSILDE RFADWKVAII DKGVGSRGSF GGTCLNVGCI PTKMFVHTAD VAGSPEAGAR LGVDLERRGV DWPAVRDRIF GRIDPIADAG ERFRAEEQPN VRLLRGNARF TGLRKLSVEL PDGDVTVSAD RVVVAAGSRP RLPPIPGLAE SGFHTSDSVM RLERLPERMI VLGSGFVAAE LAHVFASFGV AVTVVARFGA LLRGEDAAIS QRFTELASRH WDLRLNRKVV GVERDGEVVR LRLDGTDGAQ TIEAEELLVA VGRVSNADQL DATVGGLELT RHGQIAVDAH QKTTAEGVWA LGDVSSEHQL KHVANHEARI VQHNLLHPHE PIRSDGLVVP HAVFSSPQIA SVGVTEEQAR SRGLDYVSAV QDYAGIAYGW AMEDTTGFAK LLAEPDTGRL LGAHIIGPQA ATLIQPLVQA MQFGLDARTM ARGQYWIHPA MPELIENALL KLPLR
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