Gene Snas_5390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5390 
Symbol 
ID8886599 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5722191 
End bp5723588 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content67% 
IMG OID 
Productpyridine nucleotide-disulfide oxidoreductase dimerization region 
Protein accessionYP_003514115 
Protein GI291302837 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.685666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGCATT TCGACTTGAT CATTCTCGGC TCCGGTTCCG GCAACTCGAT CCTGGACGAA 
CGGTTCGCGG ACTGGAAGGT CGCGATCATC GACAAGGGAG TCGGCTCGCG CGGGTCCTTC
GGTGGTACCT GTTTGAACGT GGGATGCATT CCCACCAAGA TGTTCGTGCA CACCGCCGAT
GTGGCGGGCT CGCCGGAAGC CGGGGCCCGG CTCGGGGTGG ACCTGGAGCG CCGAGGCGTG
GACTGGCCGG CGGTGCGAGA CCGGATCTTC GGGAGGATCG ACCCGATCGC CGACGCTGGG
GAACGGTTTC GCGCCGAGGA GCAGCCCAAT GTCCGGCTGC TGCGGGGGAA CGCGCGGTTC
ACCGGCCTGC GGAAGCTGAG CGTCGAGCTT CCGGACGGGG ACGTGACTGT CAGCGCTGAC
CGCGTCGTTG TCGCAGCCGG GAGTCGGCCG CGGTTGCCGC CGATTCCCGG TCTGGCCGAG
TCCGGCTTTC ACACCAGCGA TTCGGTCATG CGGCTGGAAC GGCTTCCTGA GCGCATGATC
GTGCTGGGAT CCGGCTTCGT CGCTGCCGAA CTGGCGCACG TCTTCGCGTC TTTCGGGGTG
GCCGTGACGG TCGTGGCCCG GTTCGGCGCA CTGCTGCGCG GTGAGGACGC GGCGATTTCA
CAGCGGTTCA CCGAACTGGC GAGTCGGCAC TGGGACCTGC GGTTGAACCG CAAGGTCGTG
GGAGTCGAAC GCGACGGCGA GGTGGTCCGG CTGCGGCTGG ACGGGACAGA TGGCGCCCAG
ACCATCGAGG CGGAGGAACT GCTGGTGGCC GTCGGGCGAG TCTCCAACGC CGATCAGCTC
GATGCCACCG TCGGAGGGCT GGAGTTGACG CGTCACGGTC AGATCGCCGT GGACGCGCAC
CAGAAGACCA CGGCTGAAGG CGTCTGGGCG CTGGGCGACG TCAGCTCGGA GCATCAGCTC
AAACACGTGG CCAACCACGA GGCCCGTATC GTGCAGCACA ACCTGCTGCA CCCACACGAA
CCGATCCGTT CGGATGGACT GGTGGTGCCG CACGCAGTGT TCAGTTCGCC GCAGATCGCC
TCGGTCGGGG TCACCGAGGA ACAGGCGCGA TCGCGGGGGC TGGACTATGT CAGCGCGGTG
CAGGACTACG CCGGAATCGC CTATGGCTGG GCCATGGAGG ACACGACCGG CTTCGCCAAA
CTGCTGGCCG AACCGGACAC CGGGCGGCTG CTGGGCGCTC ACATCATCGG GCCGCAGGCC
GCCACCTTGA TTCAGCCGCT GGTGCAGGCC ATGCAGTTTG GCCTGGACGC GCGCACCATG
GCGCGAGGCC AGTACTGGAT TCATCCGGCG ATGCCGGAAT TGATTGAGAA CGCCTTGCTC
AAACTCCCGC TGCGATGA
 
Protein sequence
MSHFDLIILG SGSGNSILDE RFADWKVAII DKGVGSRGSF GGTCLNVGCI PTKMFVHTAD 
VAGSPEAGAR LGVDLERRGV DWPAVRDRIF GRIDPIADAG ERFRAEEQPN VRLLRGNARF
TGLRKLSVEL PDGDVTVSAD RVVVAAGSRP RLPPIPGLAE SGFHTSDSVM RLERLPERMI
VLGSGFVAAE LAHVFASFGV AVTVVARFGA LLRGEDAAIS QRFTELASRH WDLRLNRKVV
GVERDGEVVR LRLDGTDGAQ TIEAEELLVA VGRVSNADQL DATVGGLELT RHGQIAVDAH
QKTTAEGVWA LGDVSSEHQL KHVANHEARI VQHNLLHPHE PIRSDGLVVP HAVFSSPQIA
SVGVTEEQAR SRGLDYVSAV QDYAGIAYGW AMEDTTGFAK LLAEPDTGRL LGAHIIGPQA
ATLIQPLVQA MQFGLDARTM ARGQYWIHPA MPELIENALL KLPLR