Gene Snas_5357 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5357 
Symbol 
ID8886566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5693804 
End bp5694412 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content64% 
IMG OID 
ProductD-Ala-D-Ala dipeptidase 
Protein accessionYP_003514083 
Protein GI291302805 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.395884 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.146315 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGACG ACTTTGTCTT CGTGGACGAG GCCGTTCCCG GAATCCGTTG GGACGCCAAG 
TACGCCACCT GGGACAACTT CACCGGCAAA CCGGTCGACG GCTACCTGGT CAACCGCATC
CTGGGCACCC GCGCGCTATG CGCGGCTCTC GAACGAGCCC GCAAAGAAGC CGCGTCCCTC
GACTTCGGCC TACTCCTGTG GGACGGCTAC CGCCCCCAAC GCGCCGTCGA CCGCTTCATG
CGCTGGTCAG AACAACCCGA AGACGGCCGC ACCAAACGAC GCCACTACCC GAACATAGCC
AGAACCGAAA TGTTCGAACT AGGCTATGTA GACGCCAAAT CCGGCCACAG TCGAGGCAGC
ACCGTCGACC TCACCCTCTA CCACCTGGCC ACCGGCGAAC TCGTCCCCAT GGGCGGCGAC
CACGACCTGA TGGACCCGGT CTCCCACCAC GGAGCGACCG GAATCACCCC AACCGAAGCC
GAGAACCGCC GCCACCTCCG CTCCATCATG GAGACCGCCG GTTTCCGCGC GTACCCCTAC
GAATGGTGGC ACTACACGCT GGAGGACGAG CCCTACCCCG ACACCTACTT CGACTTCCCC
ATCACATGA
 
Protein sequence
MSDDFVFVDE AVPGIRWDAK YATWDNFTGK PVDGYLVNRI LGTRALCAAL ERARKEAASL 
DFGLLLWDGY RPQRAVDRFM RWSEQPEDGR TKRRHYPNIA RTEMFELGYV DAKSGHSRGS
TVDLTLYHLA TGELVPMGGD HDLMDPVSHH GATGITPTEA ENRRHLRSIM ETAGFRAYPY
EWWHYTLEDE PYPDTYFDFP IT