Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5355 |
Symbol | |
ID | 8886564 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5691815 |
End bp | 5692774 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein |
Protein accession | YP_003514081 |
Protein GI | 291302803 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000606099 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0391686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAATCA CGGTCTACGG CTGCGGACAG GACGAGGCCG TCCTGTTCCG CGAGATGTCA CCCAGCTACG GCGTGACCCC CACGATCACC CCGGCACCGC TAACCGAAGC CAACGTCGAA CTCGCCTTCG GCAACCGCTG CGTCAGCGTC GGTCACAAGA CCCGAATCAC CGATGCCACC CTCCGCGCGC TCAACCGAAT CGGCACAAAC TACATCTCCA CCAGGAGCAT CGGCTACAAC CACATCAATG TGGACTACGC CAAAACCCTG GACATCACCG TCGAGAACGT CTCCTACTCC CCCGACAGCG TCGCCGACTA CACCCTGATG CTCATGCTGA TGGTGGTGCG CAGCGCCAAA TCCATCATCC GCCGCACCGA CGTCCACGAC TACCGGCTCA ACGACGTATG CGGCAGAGAA CTACGCGACC TCACCGTCGG CGTCATCGGC ACCGGACGAA TCGGCGCCGC CGTCATGGAC CGACTGTGGG GCTTCGGTTG CCGCGTCCTC ACCCACGATC GCCGTCACAA GACCGGCGCC GACCACGTCC CCCTCGACCA ACTGCTGCGC CAAAGCGACA TGGTCACGCT CCACACACCA CTGAACGCGA GCACCCACCA CCTCCTCAAC CGCACCCGCC TCGAGCAGAT GAAACCCGGC GCCTACGTCA TCAACACCGG ACGCGGCTCC CTCATCGACA CCGAAGCCCT GGTCCCCGCA CTGGAGAGCG GCCGCTTGGG TGGTGCGGCC CTGGACGTCA TCGAGGGCGA AGAGGGCGTC TTCTACGCCG ACTGCCGCAA CAAGGTCATC GAGAGCAAAT CCCTGCTGCG ACTACAAGAA CTGCCCAATG TGCTCATCAG CCCGCACACG GCCTACTACA CCGACCACGC CCTGAGCGAC ACGGTCGAGA ACTCCATCAT CAATTGCCAG AAATTCGAGA ACAGGAACCA GCATGGCTAA
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Protein sequence | MGITVYGCGQ DEAVLFREMS PSYGVTPTIT PAPLTEANVE LAFGNRCVSV GHKTRITDAT LRALNRIGTN YISTRSIGYN HINVDYAKTL DITVENVSYS PDSVADYTLM LMLMVVRSAK SIIRRTDVHD YRLNDVCGRE LRDLTVGVIG TGRIGAAVMD RLWGFGCRVL THDRRHKTGA DHVPLDQLLR QSDMVTLHTP LNASTHHLLN RTRLEQMKPG AYVINTGRGS LIDTEALVPA LESGRLGGAA LDVIEGEEGV FYADCRNKVI ESKSLLRLQE LPNVLISPHT AYYTDHALSD TVENSIINCQ KFENRNQHG
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