Gene Snas_5328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5328 
Symbol 
ID8886537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5657131 
End bp5658084 
Gene Length954 bp 
Protein Length317 aa 
Translation table11 
GC content66% 
IMG OID 
Productpoly (3-hydroxybutyrate) depolymerase 
Protein accessionYP_003514055 
Protein GI291302777 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCCCC TGGTCCTCGC CCTCACCGCC ACCCTCGTCC CCGCCGCAAC CCCTGACACC 
GACGCGACCC CCGCAGACGT CTACGTCGTC GGCATCTCCT CCGGCGGCTA CATGGCCGAC
CAACTCCACA TGGCCCACTC GTCCACCTTC GACGGCCTGG GCATCTTCAG CGCCGGTCCC
TACCACTGCG CCCGGGGCAA CCTCACCACC GCCCAACTGG CCTGCATGAA CGACCTCCAG
GACAACGACC CCGGCGCCCT ACAACAACTA GCCCGCGACC GCGCCGCCGA AGGCACCATC
GACCCCGTCG ACAACCTCAC CACCAACCCC GTCTGGATCT ACCACGGCCG CAACGACTCC
ACGGTCAAGC AATCCGTCAA CGACGACCTG GCCTCCTTCT ACACCGACTT CGGCGCCAAC
GTCTCCTACC GCAACGACTC CCCGGCCGGA CACGCCTGGG TCAGCCCGTT GGGCCCCAAC
GCCTGCGAAA CCACCGCCGC CCCCTACATC AACAACTGCG GCGACGACCC CCAATCAGCC
ATGCTGACCC ACCTCCTCGG CCCCATCACC GCCCCCGCCC CCCAACTCTC GGGCGACCTC
ACCACATTCG ACCAAAACCC CCACGCCCCG GGAGGCAACG CCGCCACCAT AAGCATGGGC
CCCACCGGCT ACCGCTACAC ACCCTCCACA TGCACCAACG GCGACTGCCG CCTCCTGGTA
GCCCTCCACG GCTGCAAACA AAGCGCCACC ACCATCGGCA CCACCTTCGT CGAGAACGCC
TACCTCAACG AATACGCCGA CACCAACAAC ACCGTCGTCC TCTACCCCCA AGCCACCCCC
AGCACCGACA ACCCCAACGG CTGCTGGAAC TGGTGGGGCT ACGGCAACGA CCCGAACTAT
GACACCCACG AAGGCCAACA AATCCAAGCC ATCATGAGCA TGGTGACCGC CTGA
 
Protein sequence
MIPLVLALTA TLVPAATPDT DATPADVYVV GISSGGYMAD QLHMAHSSTF DGLGIFSAGP 
YHCARGNLTT AQLACMNDLQ DNDPGALQQL ARDRAAEGTI DPVDNLTTNP VWIYHGRNDS
TVKQSVNDDL ASFYTDFGAN VSYRNDSPAG HAWVSPLGPN ACETTAAPYI NNCGDDPQSA
MLTHLLGPIT APAPQLSGDL TTFDQNPHAP GGNAATISMG PTGYRYTPST CTNGDCRLLV
ALHGCKQSAT TIGTTFVENA YLNEYADTNN TVVLYPQATP STDNPNGCWN WWGYGNDPNY
DTHEGQQIQA IMSMVTA