Gene Snas_5301 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5301 
Symbol 
ID8886510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5627220 
End bp5628185 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content70% 
IMG OID 
ProductNAD-dependent epimerase/dehydratase 
Protein accessionYP_003514028 
Protein GI291302750 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGGTAA CGATCATCGG CGGAACCGGA CATGTCGGCA CGTTCCTGGT GCCCCGGCTG 
GTGACCGCGG GCCACGAGGT GACGGTGGTG TCGCGGGGAC AGCGACAGCC GTATCGTCCG
CACGGGGCGT GGCGGTTCGT CACGACGGTC AGCGCCGACC GGCAGGCCGA GGAGGACGCG
GGCACCTTCG GTGCCCGGAT CGCGGCACTG GAGCCCGACG TCGTCATCGA CATGATCTGC
TTCGAACCCG ACAGCGCCCG GCAGCTGGTG GAGGCGCTGG CGGGACGGGT CCGACACTTC
CTCCACTGTG GCACGATCTG GGTGTACGGG CCGAGCGCGC AGGTGCCCGG CACCGAGGAG
CAGCCGCGCC GCGCCATCAC CGAGTACGGC CGCAAGAAGG CCGAGATCGA GGCGTACCTG
CTGGATCAGG CGCAGCGGCA CGGCTTCCCG GCGACGGTGA TCCACCCCGG ACACATCTCG
GGACCCGGGT GGACGCCGAT CAACCCGGCG GGCAACCTCA ACCTGGACGT GTTCCAGAAG
CTCGCCGACG GCGACACCCT GATGCTGCCG AACCTGGGAA TGGAGACGCT GCAACACGTT
CACGCCGACG ACGTGGCGCA GGTGTTCGGC GCCGCGATCG CGAACCGCTC GGCGGCGCTG
GGCGAGAGCT TCAACGCGGT GGCCGCCACG GCGCTGACGC TGCGCGGCTA CGCCGAGGCG
GCGGCGGGCT GGTTCGGCCA GGTCGCGCGG CTGAAGTACC TGTCGTGGGA GGAATGGCGC
CGCACCGTCG ACGAGACCGA CGCCGACGTC ACCCACACCC ACCTCGAACA CAGTCCACAC
TGCTCGATCG ACAAGGCCCG GCGGCTGCTG GGCTACCGGC CCCGGTACTC CTCACTGGAG
GCCACGGCCG AGGCCGTGGA CCGGCTGGTG AGCGACGGCC AGGTGCGGGT CAACGAGAGC
ACTTGA
 
Protein sequence
MRVTIIGGTG HVGTFLVPRL VTAGHEVTVV SRGQRQPYRP HGAWRFVTTV SADRQAEEDA 
GTFGARIAAL EPDVVIDMIC FEPDSARQLV EALAGRVRHF LHCGTIWVYG PSAQVPGTEE
QPRRAITEYG RKKAEIEAYL LDQAQRHGFP ATVIHPGHIS GPGWTPINPA GNLNLDVFQK
LADGDTLMLP NLGMETLQHV HADDVAQVFG AAIANRSAAL GESFNAVAAT ALTLRGYAEA
AAGWFGQVAR LKYLSWEEWR RTVDETDADV THTHLEHSPH CSIDKARRLL GYRPRYSSLE
ATAEAVDRLV SDGQVRVNES T