Gene Snas_5226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5226 
Symbol 
ID8886435 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5552508 
End bp5553206 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content65% 
IMG OID 
Productsuccinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family 
Protein accessionYP_003513953 
Protein GI291302675 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.659041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGG ACACACGCAG CAAGCGACCG CCCGTCGCGG TGACGCTGTG GAAGGCGACG 
ATCGGGAAGA AGATCATCAT GGCCCTCACC GGGCTGATCA TGATCGGTTA CCTGGTCCTG
CACATGGCGG GGAACCTGAA GATCTTCTCG GGGGCGAAGA AGTTCAACGA CTACTCGCAC
TGGCTGCGCA CCTTCGGAGA GCCGGTGCTG CCCTACGAGG GTTTCCTGTG GATCCTGCGG
GTGGTGCTGC TGGGCAGCGT CATCGCGCAC ATCGCCGCGG CGGTGGCGTT GACCCACCGC
AGTCACCAGC CGCATCGGGC GTCGAAGAAG AAGGTGCTGG GACGCAACTA CGTCACCTTC
ACGATGCGCT CGGGCGGGGT GATCCTGGCG CTGTTCGTGG TGTGGCACGT GCTGGACCTG
ACGACGCTGA CGGTCAACAC CCGCGCCCAG GCCGGTCACC CGTACGAGAA CCTGGTCGCC
AGTTTCTCGA CCTGGTACGG CAACGTGATC TACCTGGTCG CGGTCACCGC GGTCGGTTTC
CACCTGTGGT TCGGCACCTG GCACGCGGCC CAGACGCTCG GTGTGTCCGA CGCCGCGCGG
ATGCGGCTCA TCCGGCAGGT CGCCGCCATC CTGGCGACGG TCATCGCCGT CGGTTTCGCC
CTCGCCCCGA TCTCCGTCAT GGCTGGAGTA GTGCAATGA
 
Protein sequence
MALDTRSKRP PVAVTLWKAT IGKKIIMALT GLIMIGYLVL HMAGNLKIFS GAKKFNDYSH 
WLRTFGEPVL PYEGFLWILR VVLLGSVIAH IAAAVALTHR SHQPHRASKK KVLGRNYVTF
TMRSGGVILA LFVVWHVLDL TTLTVNTRAQ AGHPYENLVA SFSTWYGNVI YLVAVTAVGF
HLWFGTWHAA QTLGVSDAAR MRLIRQVAAI LATVIAVGFA LAPISVMAGV VQ