Gene Snas_5106 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5106 
Symbol 
ID8886314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5422687 
End bp5424009 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content70% 
IMG OID 
Productaminoglycoside phosphotransferase 
Protein accessionYP_003513834 
Protein GI291302556 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00610606 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.334332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTTCCTG TCGACATCCG CGCCCTGGTC CCGCATCCGG AGGGCACCGC CGTCTGGGTC 
ATCGAAACCG ACGGCGGCCT CGCGCTGCCG TCCGTCACGA TCGACGCGGA CGGTCCGAAC
GACGACCTCG CGCCGAAACT GGCCGCCTTG GCCAAGGCGC ACGGCATCGA CTCGCCGTTC
CTGCGCCGCG TCGGCCTGAC GAAACACGAC GGACGCGACC TGATCCTCAA GGAGTTCGAA
CCGCTGCCCG CCACCGGCAG ACGGTGGCTG CCCTTGGACG AGCTGGCACG GCTGGACCTG
CCCGAGGACC TGCGGCCCGC CCTGGCCACC TGGACCGCCT ACCAGCGCGG CGCGGAATAC
CCCGAGTTCC GGCCCGCGTG GACCCGCCCC GGCTGGCATG CGAGCACCCG ACGGTGGCTG
ACCGACCAGC TGACGCGGCG CGACATCGAG CCCGTCGGCG AGCCGACGCT GGTGCAGCAG
TGGGCGATCT CCTCGGTGTT GAAGCAGCCC ACTCGCGAGC ACGGCGACCA CTACCTCAAG
TCGGTGTTCG GCAGCCCCGG GCGGGCGTTC TGGCACGAAC CGGCGCTGTC GGCGACCCTC
GCCCGCGAGC ACCCCGGCCA GGTCCCTGCC GTCACGACGA TCGACTCCGA CCGGGGCCTG
ATGCTCATGC CCGACATGGG AATCACCTAC GTCGACGAAT TCCCGGTCGA GCGCTGGGAC
GGCGGCCTGC GGGTGCTGGC CGAGATCCAG CGGCACTGGG CCAACCGCCG CGACGAACTG
CTGGCGTTGG GCTGCCCCGA CCGCGACTTC GCCACCACCG CCGACCAGCT CGCCGCCGCG
CTGGCGGATC CGCTGTTCGC CGACAAACTC GACCCTGCCG TCCACAAGCG AGTCTCGGAG
CTGATGCCGC GCTGGCGTCA GCTGCTACTG GACGCGACAC AGTGGCCGGT CCCGCTGTCC
CTGTCGCACG GCGATTTCCA CCCCGGCAAC GTCGGACTGC GCGCCGACGG CAGCACCTGC
GTCTTCGACT GGTCGGACGG CGCCTGGAGC CACCCGTTCC TGGACGTGGA GGTCTACGTC
CGCAACAGCG GCGAGGCCCA GACGCGACTG TGGGACGTCT ACCTGGACCA CTGGACCGAC
TACGCGCCGC TTTCCGAACT GCGGCAACTG ATCCCGTCGG TGAACCTGCT CGGACTGCTG
TACCGCACGG TCACCTACCA CGGCCTGTTG ACCAATGTCG ACCCCGACGA TCGGTTCGTG
TTCGGCGAGT TCGCCGAACT GCACTGGACC AAGTCGCTGG AAGCCTGGGA CGCGATGGCC
TAG
 
Protein sequence
MLPVDIRALV PHPEGTAVWV IETDGGLALP SVTIDADGPN DDLAPKLAAL AKAHGIDSPF 
LRRVGLTKHD GRDLILKEFE PLPATGRRWL PLDELARLDL PEDLRPALAT WTAYQRGAEY
PEFRPAWTRP GWHASTRRWL TDQLTRRDIE PVGEPTLVQQ WAISSVLKQP TREHGDHYLK
SVFGSPGRAF WHEPALSATL AREHPGQVPA VTTIDSDRGL MLMPDMGITY VDEFPVERWD
GGLRVLAEIQ RHWANRRDEL LALGCPDRDF ATTADQLAAA LADPLFADKL DPAVHKRVSE
LMPRWRQLLL DATQWPVPLS LSHGDFHPGN VGLRADGSTC VFDWSDGAWS HPFLDVEVYV
RNSGEAQTRL WDVYLDHWTD YAPLSELRQL IPSVNLLGLL YRTVTYHGLL TNVDPDDRFV
FGEFAELHWT KSLEAWDAMA