Gene Snas_5098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5098 
Symbol 
ID8886306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5415841 
End bp5416623 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513826 
Protein GI291302548 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0555591 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGGATAC TGCTGCCGCC CTCCGAGGGC AAGACCACCC CCGAGGCCGG GCCGCCGGTG 
GCGTTGCCAC GGCTGCTGCG CCCCGCGTTG GGGCAGGCCC GGCAGCAGGT CATGGACGCG
CTGGTGCGGT TGTGCGAGGC CGACACCGAC GCGGCGATGC GGGTGCTGAA GCTGGGGGAG
CGGCTGCGCG GCGACGTCGC CGCCAACGCG AAGCTCGCCA CCGCTCCCGC CGCTGCCGCC
GAGCACGTCT ACACCGGGGT GCTGTTCGAG GCCCTCGACC TGCCCAACCT CAGCCCCGCG
GCCAGAAAAC GGGCCGACGA ACGGGTGGTG ATCTTCTCCG GATTGTGGGG CGTGGTGCGG
CCCGGCGACC CGATCCCGGC GTACCGGTGC CCGGTGGGGG CGACGCTGCC GCATGTGGAG
GGGAAACGCC CGGTCGGACT GGGTTCGTTC TGGCGGCGGC AGCTGGAGCC GGAACTGGCC
GCCGAGTTCG ACGGGCAGTT CCTGGTCGAC CTGCGCTCGG GGCCGTACGC GGCGATGTGG
CGCCCCGCGC CCGGCAGCCA CGCGGCGGTG CGGGTGCTGC ACGAACGCCT GGTCGGCGGC
GAGTTGACCC GCAGCGTCGT CAGCCACTTC AACAAGGCCA CCAAGGGACG GCTCGCCGCC
GAGCTGCTGC GGGAGGCGGT CGAGGCCGAT TCGGTGGCCT CGTTCACCGA AGCGTTGCGG
GACTTGAAAT ACCGCGTGGA AGCCGAAGCG TCCCGGGTGG ACATCATCGT CACCGAACTG
TGA
 
Protein sequence
MRILLPPSEG KTTPEAGPPV ALPRLLRPAL GQARQQVMDA LVRLCEADTD AAMRVLKLGE 
RLRGDVAANA KLATAPAAAA EHVYTGVLFE ALDLPNLSPA ARKRADERVV IFSGLWGVVR
PGDPIPAYRC PVGATLPHVE GKRPVGLGSF WRRQLEPELA AEFDGQFLVD LRSGPYAAMW
RPAPGSHAAV RVLHERLVGG ELTRSVVSHF NKATKGRLAA ELLREAVEAD SVASFTEALR
DLKYRVEAEA SRVDIIVTEL