Gene Snas_5088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5088 
Symbol 
ID8886295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5405013 
End bp5405756 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content74% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003513817 
Protein GI291302539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.880043 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGATTT CGCGCATCAT CGAGTTGGGG GAGCCGGGGC CGGACTTCGA CGCGGTCTAC 
CGCGACATGC TGGCCCCGAA CTTCCCCGCC CACGAACTGG AGCCCGCCGA GGTCATCGCC
GAGGGGATCG CGGCGGGCAC CACCAGCGTC CTGGTGGCGC TGGCCGAGGA CGGTCACCGC
CTGGGGACCG CGATCGGCGA ATGGGACGCG GACCATCGGG TCCAGTTGCT GACATACCTG
GCCGTCGACG GCCGCCGCAG GGCCGGTGGC GTCGGCGGCC GGTTGCTGGA CGCGGCCCGG
CAGCGGTGGG TGGCGCGGTA CCGGCCGCTG GTGTTGCTGG CCGAGGTCGA GCACCCGGCG
ACCGAGGCGG GGGAGGCGGC GTGGGGTGAT CCGCGTCGCC GGTTCGACTT CTACGTCCGC
CGTGGCGCGC GGGTGCTGGA CCTGCCGTAC TTCCAGCCCG CGCTGGGCGA GGGCGCGCAG
CGCGGCTACG GGATGCTGCT GATCACGCTG TACCTCGACG ACGAGTTCCG GGAGCCCGGG
GCGGATCGGG TGCCCTCGGC GCCGGTGCGG GGGTTCCTGG AGGACTACCT GCGGGAGTGT
GAGGGCGAAG TGGCCGACGA CGCGGCCACC ACGGCGCTGC TGGCCGCCTG TGCCGACGAC
CGGGGCATCG GGCTGCTGGA TCCGGCCGCG ACTCCAGTGG AGCGGTTGCC GCGGTCGACG
CCGAACGCCG CCGGGCTGTC GTAG
 
Protein sequence
MTISRIIELG EPGPDFDAVY RDMLAPNFPA HELEPAEVIA EGIAAGTTSV LVALAEDGHR 
LGTAIGEWDA DHRVQLLTYL AVDGRRRAGG VGGRLLDAAR QRWVARYRPL VLLAEVEHPA
TEAGEAAWGD PRRRFDFYVR RGARVLDLPY FQPALGEGAQ RGYGMLLITL YLDDEFREPG
ADRVPSAPVR GFLEDYLREC EGEVADDAAT TALLAACADD RGIGLLDPAA TPVERLPRST
PNAAGLS