| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5061 |
|---|
| Symbol | |
|---|
| ID | 8886268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5373617 |
|---|
| End bp | 5375764 |
|---|
| Gene Length | 2148 bp |
|---|
| Protein Length | 715 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | Histidine ammonia-lyase |
|---|
| Protein accession | YP_003513790 |
|---|
| Protein GI | 291302512 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.14793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGACTG ACGTGCTTTC GCCGAGCGGG CATCCGACGA GCATCACACC ACTGGGAGAG
GACGGACTCG GCATCGCCGA CGTCGTCGCG GTCGCGCGCC GACATAGCGC CGAGGTTCCC
TCCATATCCG AAGAATCGCG GGCGCGCATG ACCGCCTCGG TGGCACTGCG GGACCGGCTC
ATCGCCACCG GACAACCGAT CTACGGCGTC ACCACCGGTG TCGGCGACAG CGTGAAACAC
CACCTCAGTC CACAGCGCGC GGCCTACCTT CAGGACAACC TGGTCCGGCT GCTGCTGGTG
GGCACCGGCC CCGAGGCGGC GCCGTCGGTG GTGCGGGCCA TGATGCTGAT CCGCGCCAAC
TGCCTGGCGC GCGGGCATTC CGCGATCCGC GCCGAGGCGG TGGACCTGAT CCTGGCGCTG
CTGCGACACG ACATCGTGCC GGTGGTTCCC GAATGCGGAT CGGTCGGCGC CAGCGGCGAC
CTGGCCCCGC TGGCCTATCT GGCCAACGTG CTCATCGGCT CCGGAACCGT CGAACACCGC
GGCGTCCGAC GCGACGCCGC CGAGGCACTG CGGGACTGCG CCCTGGCCCC GCTCGTGCTG
CAACCCAAGG AAAGCCTGGC GCTGCTCAAC GGCACCTCGC TCATGGCCGC CTTCGCTACC
CTGGCCGTGC ACGACGCCAC CGAGCTGGCC GTGACCGCCG ACGTGTGCAC CGCGCTGACC
GTCGAGGCAC TCACCGCCAA TGTGGACCAC TTCCATCCCC GGCTTCACGC CCAGAAACCA
CACCCGGGAC AACTCCGCAG CGCCGCGCGG ATCCGGGCAC TGCTGGAAGG CTCCGGCCTG
ACGCGGACCC ACGCCCAGAT CGTCGACGGC ACCCCGGCCG TCGCCGAGGG CGGGATGCAG
CACGTCGACC AGACGGTGCA GGAACGCTAC TCGGTGCGCT GCGCCCCGCA CGTGGTCGGC
GTCGTGGACG ACACCCTGGA ATGGTCGCGC CGCTGGGTCG AGATCGAAGT CAACTCCTCC
AACGACAACC CGCTGTTCGA CACCGGTCTG GGCACCGTCC ACAACGGCGG CCACTTCTAC
GGCGGCCACA TGGGACAAAC GGCCGACGCC CTCAAGATCG CCGTGGCCAA CCTCGGCGAC
CTGCTGGACC GACAACTCGC GCTGCTGGTC GACGACAAGT TCAACCGGGG CCTACCCCCG
GTACTGGCCC CACATCTGAC CGAGGGCGAC CCGGAGGCCG GACTGCACCA CGGCCTGAAG
GGCGCCCAGA TCGCGGCCTC GGCACTCACC GCCGAAGCCC TGCACCGGGC CGCGCCCGCC
ACCACCCACT CCCGCTCCAC CGAGTCCCAC AACCAGGACA AGGTCAGCAT GGGCACCATC
GCCACCCGGG GCGCCCGCGA CGTGGTCGAC CTGGTCACCA GGGTCGCCGC GATCCACCTG
CTCGCGGCCT GCCAGGCCGT CGACCTGCGC GACCCCGACC TGCTCGCCCC CGGTACGCGG
GCAGCCTTCG ACGCCGTCCG CAAACTAGCC CCGTTCATCG ACGCCGACCG ACGGCTCGAC
ACCGACATCG CCGCGATCGC CGAGCTGATC ACCTCCGGAG AGCTCGGCCG AACCGTGGCG
CCGTACCTGC CGGAGTTACT CCGGTGTGAA GGGGTTGGCT GGCCGCGCGT CCAACGCGCG
GCCAGCCCTG GGGGCGTTGA CGTTTGGTGT GGATTGCCGT CAGAGTTCGT AGGGGTGGAC
AGCGACCTTG CCGTGTTGGA TGAAGAGCTC GACCCACGTG CCGATGACGT TGTCGGGCAG
CCGAGCGGCA AGGTCCAGGA GGATTGGCGT GCCGTCCAGG TCCAGCACAG CGGCACCGTC
CTCGGTGAGG CTCAGCTGTC CCCGCAGGAC AACGCAATGC CCGCCAGTGC GCAGCCCGGG
ACCGGTACCA GTAGCTGGCT TGGCGTTTCG GCCCCAGACG ATGTCCTCGT CGATCGTCCA
CTCGACGTGG TATTCGCCGG GCTGCGCGGC CGGGTCACCA CGCCAGCCGA CCGAGGCGCG
ACCGAACGCG GTCTGGATGG CGGCCTTCCA GGGAGTTCCG GGAAACTTTG CGACTCTCAC
CACCTCGATC AGCACGGTTC CATTGTGCGG GATCATCGGC CACGATGA
|
|---|
| Protein sequence | MTTDVLSPSG HPTSITPLGE DGLGIADVVA VARRHSAEVP SISEESRARM TASVALRDRL
IATGQPIYGV TTGVGDSVKH HLSPQRAAYL QDNLVRLLLV GTGPEAAPSV VRAMMLIRAN
CLARGHSAIR AEAVDLILAL LRHDIVPVVP ECGSVGASGD LAPLAYLANV LIGSGTVEHR
GVRRDAAEAL RDCALAPLVL QPKESLALLN GTSLMAAFAT LAVHDATELA VTADVCTALT
VEALTANVDH FHPRLHAQKP HPGQLRSAAR IRALLEGSGL TRTHAQIVDG TPAVAEGGMQ
HVDQTVQERY SVRCAPHVVG VVDDTLEWSR RWVEIEVNSS NDNPLFDTGL GTVHNGGHFY
GGHMGQTADA LKIAVANLGD LLDRQLALLV DDKFNRGLPP VLAPHLTEGD PEAGLHHGLK
GAQIAASALT AEALHRAAPA TTHSRSTESH NQDKVSMGTI ATRGARDVVD LVTRVAAIHL
LAACQAVDLR DPDLLAPGTR AAFDAVRKLA PFIDADRRLD TDIAAIAELI TSGELGRTVA
PYLPELLRCE GVGWPRVQRA ASPGGVDVWC GLPSEFVGVD SDLAVLDEEL DPRADDVVGQ
PSGKVQEDWR AVQVQHSGTV LGEAQLSPQD NAMPASAQPG TGTSSWLGVS APDDVLVDRP
LDVVFAGLRG RVTTPADRGA TERGLDGGLP GSSGKLCDSH HLDQHGSIVR DHRPR
|
|---|
| |