Gene Snas_5057 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5057 
Symbol 
ID8886264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5367204 
End bp5368499 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content68% 
IMG OID 
ProductMandelate racemase/muconate lactonizing protein 
Protein accessionYP_003513786 
Protein GI291302508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCGCA TCACCGCCGT GGAGACCCAC GACGTCCGGT TCCCGACCTC GGCCGAACTG 
GCCGGTTCGG ACGCCATGCA CCCCGACGGC GACTACTCGG CCGCCTACCT GACGCTGCGC
ACCGACCACC CCGACGGCCA CTCCGGCGCC GGGTTCACCT TCACCATCGG ACGCGGCAAC
GACATCTGCG TCGCCGCGAT CGAGGCGATG GGCGCGACGC TGGTCGGCCT CGACCTCGAC
GAGGCCTTCG CCGACATGGG AGCCTTCGCG CGCCGCTTCA CCCACGACTC CCAGTTCCGT
TGGCTGGGAC CGGAGAAGGG GGTGGTGCAC CTGGCCGCCG GCGCCCTGAT CAACGCGATG
TGGGACCTGT ACGCGCGCGT CGAGGGCAAA CCACTGTGGA AACTGCTGGC CGACCTCAGC
CCCGAACAGA TCGTGTCCCT GGTGGACTGG CGGTACCTGA CCGACGCCCT CACCCCCGAC
GAGGCCCTGG ACATGTTGCG CGCCAAGGCT AGTGGCCGCG CCGAACGCGA GGCCGACCTG
CGGGCCACCG GCTTCCCCGC GTACACCACC TCGCCGGGCT GGCTGGGTTA CGACGACGAG
AAGATGATCG CGCTGGCCAC CGAGGCCGTC GCGGCCGGAT TCACCATGAT CAAACTCAAG
GTGGGCGGCC GGATCGAGGA CGACATCCGC CGGTTCGCGC TCGCCCGGGA GAAACTCGGC
GACGGCATCC GGCTGGCCAG CGACGCCAAC CAGAAATGGG ACGTCAACGA GGCCATCGAC
TGGATGACCC GCCTCAAACC CTACGATCCC TACTGGATCG AGGAACCCAC CGCGCCCGAC
GACATCCTGG GACACGCGGC CATCCGCAAG GCCGTGGCAC CCATCAAGGT CGCCACCGGC
GAACACGCCC ACAACCGGAT CCTGTTCAAA CAGCTGCTAC AGGCCGGATC GCTGGACGTA
CTGCAGATCG ACGCCGCCCG GGTCGCCGGA GTCAACGAGA ACATCGCGAT CCTGCTGCTG
GCCGCCAAGT TCGGCGTCCC GGTGTGCCCG CACGCCGGGG GAGTGGGACT GTGCGAACTG
GTGCAACACC TGTCCATGTT CGACTACATC GCCGTGAGCG GCAGCAAGAG TGACCGCGCC
ATCGAGTCGG TGCCGCACCT GCACGAGCAC TTCACCGACC CGATCAGCTA CGGCCCGTCC
TACACCGCTC CCACCGCGCC GGGCTTCAGC GCCCGGATGT ACCCGGAATC GTTGCGGGAC
TACGCCTACC CCGACGGCGC GATCTGGCAG AGCTGA
 
Protein sequence
MPRITAVETH DVRFPTSAEL AGSDAMHPDG DYSAAYLTLR TDHPDGHSGA GFTFTIGRGN 
DICVAAIEAM GATLVGLDLD EAFADMGAFA RRFTHDSQFR WLGPEKGVVH LAAGALINAM
WDLYARVEGK PLWKLLADLS PEQIVSLVDW RYLTDALTPD EALDMLRAKA SGRAEREADL
RATGFPAYTT SPGWLGYDDE KMIALATEAV AAGFTMIKLK VGGRIEDDIR RFALAREKLG
DGIRLASDAN QKWDVNEAID WMTRLKPYDP YWIEEPTAPD DILGHAAIRK AVAPIKVATG
EHAHNRILFK QLLQAGSLDV LQIDAARVAG VNENIAILLL AAKFGVPVCP HAGGVGLCEL
VQHLSMFDYI AVSGSKSDRA IESVPHLHEH FTDPISYGPS YTAPTAPGFS ARMYPESLRD
YAYPDGAIWQ S