Gene Snas_5037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5037 
Symbol 
ID8886244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5346365 
End bp5347378 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID 
ProductThreonine aldolase 
Protein accessionYP_003513767 
Protein GI291302489 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.258099 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGTTG ACCTTCGTTC CGACACCGTC ACCAAACCCA CGCCCGGGAT GCGCGAGGCC 
ATGGCCACCG CCGAAGTCGG TGACGACGTC TACGGCGAGG ACCCGACGGT GACCGCGTTG
GAGACCGAGG TCGCGGCGCT GCTGGGCAAG GAGGCGGCGC TGTTCGTGCC CTCGGGGTCG
ATGGGCAACC AGATCGCGTT GCAGTTGCTG GTGTCGCCGG GGGAGGAACT GCTGGCCGAC
TCCGACGCCC ACATCGTGTC CCACGAGGTG GGCGCGGCGG CGGCGATCGG CGGCATCTCG
ACTCGCACCT GGCCGACCCG TGGCGGTCAC CTGGACGTCG GCGTCGTGGA GGAGTTCATC
CGCACCGGGG TCGGCTACCA CACCGTCAAC ACTGCGGCGA TCGCGGTGGA GAACACCCAC
AACCGTGGCG GCGGAACGGC TCTGCCACTG TACAAACTGG AGAAACTGCG GACGGTCGCC
GACGAGCGCG GCCTCAAACT CCACTTGGAC GGCGCCCGGT TGTGGCACGC CCACGTCAAG
GACGGGGTGC CGCTGGCGCG CTACGGCACC CTGTTCGACA CCGTCTCGGT GTGCCTGTCC
AAGGGACTGG GCGCCCCGGT GGGTTCACTG GTGGTTGCCG ACGCCGAGGG CATCGAACGG
GCCCGGGTGC TGCGCAAGCG CATGGGCGGC GGCATGCGAC AGGCCGGGAT CCTGGCCGCC
GCGGGCCGCT ACGCACTCAC CCACCATCTC GCCCGGCTCA AGGACGACCA CGCCCGGGCG
CACCGGCTCG CCGCCGCCCT GGAACCCTTC GGTGTCACCG ATCTGTCGCG GGTGCAGACC
AACATCATCC TGCTGCGGAT CCCCCGCATC GCCGACTTCG CGGCGGCGGC GGCCGACAAG
GGCGTGATGG TGTCGGTGAT GAGCAAGGAT CAAGGCCGCC TGTTGACGCA TCTCGACGTC
GACGACGACG GCCTCGACCA CGCGATCAAG GTGCTGACCG ACCTGCTGCG CTAA
 
Protein sequence
MTVDLRSDTV TKPTPGMREA MATAEVGDDV YGEDPTVTAL ETEVAALLGK EAALFVPSGS 
MGNQIALQLL VSPGEELLAD SDAHIVSHEV GAAAAIGGIS TRTWPTRGGH LDVGVVEEFI
RTGVGYHTVN TAAIAVENTH NRGGGTALPL YKLEKLRTVA DERGLKLHLD GARLWHAHVK
DGVPLARYGT LFDTVSVCLS KGLGAPVGSL VVADAEGIER ARVLRKRMGG GMRQAGILAA
AGRYALTHHL ARLKDDHARA HRLAAALEPF GVTDLSRVQT NIILLRIPRI ADFAAAAADK
GVMVSVMSKD QGRLLTHLDV DDDGLDHAIK VLTDLLR