Gene Snas_5027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5027 
Symbol 
ID8886234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5336582 
End bp5337478 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content70% 
IMG OID 
Product5,10-methylenetetrahydrofolate reductase 
Protein accessionYP_003513757 
Protein GI291302479 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.641097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.199479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGGC AACCGGCCGC GATCGTCGAC CTGCTGCGTG AGGGGCCGAC GTTCTCGTTC 
GAGTTCTTCC CGCCCAAGAC CCCCAAGGGC GAGGAGACGC TGTGGCAGGC GATCCGGGAG
CTGGAACCGC TGCAACCGTC GTTCGTGTCG GTCACCTACG GCGCGGGCGG TTCGACGCGG
GCCGGGACGG TCAACACCAC CGACCGGATC GCCGCCGAGA CGACGCTGCT GCCGCTGGCG
CACTTCACCG CCGTCAACCA CTCGGTGGAG GAGCTGCGCA ACCTCATCGG CCACTTCGCG
GCCGGGGGCG TTCGCAACAT CATCGCGCTG CGCGGCGACC CGCCCGGTGA CCCGTTGGGC
GAGTGGACGC AGCACCCGCA GGGCCTCAAG TACGCCTACC AGCTGGTGGA GCTGATCAAG
TCCTCCGGCG ACTTCTGCGT CGGGGTGGCG GCGTTCCCGG AGAAGCACCC GCGCAGCCCT
GACTGGGACA CCTGCACCCA GCACTTCATC GAGAAGTGCC GCGCCGGGGC CGATTACGCG
ATCACCCAGT TCTTCTTCGA CTGGCAGGAC TGGGTCCGGT TGCGGGACGC GGTGGACGCC
GCCGGGGTCG ACGTCCCGAT CATCCCGGGC GTCATGCCGG TCACCAACGT CAAGCAGATC
AAGCGGATGG CGGAGCTGTC GGGCGCCGAG TTCCCCGCCG ACCTGGCCCG CCGGTTGCAG
GCGGTGGCCG AGGACGCCGA CGCGGTGCGC GCCATCGGCG TCGAGGTCGC CACCGAGCTG
TCGCAGCGGT TGTTGGCCGA GGGCGCCCCG GGCATCCACT TCATCACGAT GAACCGTTCC
ACCGCGACCC GCGAGGTGTG GCAGAACCTG CGCCCGGTCG CGGCCCGCTC CGCCTGA
 
Protein sequence
MPGQPAAIVD LLREGPTFSF EFFPPKTPKG EETLWQAIRE LEPLQPSFVS VTYGAGGSTR 
AGTVNTTDRI AAETTLLPLA HFTAVNHSVE ELRNLIGHFA AGGVRNIIAL RGDPPGDPLG
EWTQHPQGLK YAYQLVELIK SSGDFCVGVA AFPEKHPRSP DWDTCTQHFI EKCRAGADYA
ITQFFFDWQD WVRLRDAVDA AGVDVPIIPG VMPVTNVKQI KRMAELSGAE FPADLARRLQ
AVAEDADAVR AIGVEVATEL SQRLLAEGAP GIHFITMNRS TATREVWQNL RPVAARSA